Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01281 ATGGTAATAGTAGCATCGCTCCCTGGGGGTAACCTCTTCTCCTCTTTACCTACACCTCCACCACCGAGCGACCCCACCCTTTCCACCTCCACTCCTCCTCCGCCGATCCCAGTTCCGAAATACCCACCTCCCAGAAAATCCCAACAACTCCCTCCTAAACCCCAACCTAATCCTGCTCTTAAATACCATCGCAACTCAAAGTACCACAAACCCGTCAAAGATGGGGTCATTGCATCTGACGGTGACCGTGCCGTCGTCATCGGTGAGTCCGGAGTGTCCTATCGCCTACCTGGTGCCCCATTTGAGTTCCAGTTTAGCTATTCTGAGACTCCAAAGGTAAAGCCTTTCGCAATACGGGAACCAGCGTTCTTGCCTTTTGCTCCACCCACAATGCCGAGACCCTGGACAGGGAAAGCCCCATTGAAGAGCTCGAAGAAGAAGATTCCGCTTTTTGATTCGTTTAATCCTCCTCCTCCGGGTATGAAAGGCGTGAAGCAAGTTGAAATGCCTGGGCCATTTCCACTTGGGAAGTATCCCAAGGAGGGGAGGACAAGGGAGGAGATATTGGGAGAGCCTTTGAAGAAATGGGAAATACGAATGCTTATTAAACCTATGTTGTCTGATAATCGCCAGGTTAATCTTGGTAGGGACGGGTTAACACATAATATGTTGGAGTTGATACATTCACATTGGAAGCGCCGCCGTGTCTGTAAAGTCCGTTGTAAAGGTGTTCCAACTGTAAACATGGATAATGTTTGCCGTCATCTCGAGGAGAAAACTGGAGGGAAAATAATTCATCGAGTTGGTGGTTTGTTGTATCTTTACCGTGGGAGAAATTACAATTATCGTACTCGCCCACAGTACCCAGTGATGCTCTGGAAGCCAGCTGCTCCAGTTTACCCGAAACTTATCCAAGAAGCTCCAGAGGGattaacaaaagaagaagctgatgACTTACGGCGAAAAGGGAAAAATCTATTGCCAATATGTAAATTAGCTAAAAATGGAGTCTATATCTCTCTTGTGAATGATGTTAGACATGCGTTTGAAGGTAGTCCTCTGGTGAAGATTGACTGCAAGGGGCTGAATGCCAGtgattacaaaaaaataggTGCCAAGCTTAAGGAAATGGTTCCTTGTGTTCTGTTATCTTTTGATGATGAACAGATATTGATGTATAGGGGAAAAGATTGGAAGTCAATGTACCCAGAATCTCCTCCAGCTTTAAGGCCCTCTGAAGCTGGCATTGCAGAAAATTTGGACAATTCAGGTGAGACTGGTGATGGTCAATCCAATCATGACAACAACATGGTGAATACAAGTCCTAAAATGCTGTCTCTGTGGAAGCGAGCAATTGAATCAAGCAAAGCATTGTTGCTGGATGAGATTAATCTTGGTCCTGATGCTCTCTTGGAGAAGGTAGAGGAATTTGAGGCTATTTCACTGGCCACAGAGCACTCCTATCCGGCGGTCATTTTGTCGAGTGAGGATGGTGCTAAAGGCTTAATGGAAGACTTTGAAGATGACACAGAAGGTGATACCTATTCTAAGGACTATACTGATGATGACGACGACGACGACAACGATGATTACGTCTATGATAAAGATGAACATTCTGAGGATGATTTGGGTGATCTGGAGTTATCAGCCCCACCCGGATCATTGCCTGTTGATTTGATTGCCAAGAAGTTAGGAGATgtacaaaagta 1709 0.4476 MVIVASLPGGNLFSSLPTPPPPSDPTLSTSTPPPPIPVPKYPPPRKSQQLPPKPQPNPALKYHRNSKYHKPVKDGVIASDGDRAVVIGESGVSYRLPGAPFEFQFSYSETPKVKPFAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGMKGVKQVEMPGPFPLGKYPKEGRTREEILGEPLKKWEIRMLIKPMLSDNRQVNLGRDGLTHNMLELIHSHWKRRRVCKVRCKGVPTVNMDNVCRHLEEKTGGKIIHRVGGLLYLYRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKEEADDLRRKGKNLLPICKLAKNGVYISLVNDVRHAFEGSPLVKIDCKGLNASDYKKIGAKLKEMVPCVLLSFDDEQILMYRGKDWKSMYPESPPALRPSEAGIAENLDNSGETGDGQSNHDNNMVNTSPKMLSLWKRAIESSKALLLDEINLGPDALLEKVEEFEAISLATEHSYPAVILSSEDGAKGLMEDFEDDTEGDTYSKDYTDDDDDDDNDDYVYDKDEHSEDDLGDLELSAPPGSLPVDLIAKKLGDVQK 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01281 569 MobiDBLite consensus disorder prediction 402 440 - -
Bva08g01281 569 MobiDBLite consensus disorder prediction 14 58 - -
Bva08g01281 569 MobiDBLite consensus disorder prediction 503 557 - -
Bva08g01281 569 MobiDBLite consensus disorder prediction 423 440 - -
Bva08g01281 569 ProSiteProfiles CRM domain profile. 309 405 IPR001890 GO:0003723
Bva08g01281 569 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 1 565 - -
Bva08g01281 569 Gene3D - 192 288 IPR035920 -
Bva08g01281 569 SUPERFAMILY YhbY-like 311 402 IPR035920 -
Bva08g01281 569 SMART CRS1_YhbY_2 193 276 IPR001890 GO:0003723
Bva08g01281 569 SMART CRS1_YhbY_2 311 394 IPR001890 GO:0003723
Bva08g01281 569 MobiDBLite consensus disorder prediction 503 536 - -
Bva08g01281 569 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 1 565 IPR044599 GO:0000373
Bva08g01281 569 ProSiteProfiles CRM domain profile. 191 287 IPR001890 GO:0003723
Bva08g01281 569 SUPERFAMILY YhbY-like 192 286 IPR035920 -
Bva08g01281 569 MobiDBLite consensus disorder prediction 1 66 - -
Bva08g01281 569 Pfam CRS1 / YhbY (CRM) domain 311 394 IPR001890 GO:0003723
Bva08g01281 569 Pfam CRS1 / YhbY (CRM) domain 195 276 IPR001890 GO:0003723
Bva08g01281 569 Gene3D - 311 405 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01281 Bva-Chr8 6703810 6707727 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01281 - - peu:105140245 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01281 08 6703810 6707727 Bva08g01281 08 6703810 6707727 ECH