Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01279 ATGGATGAATTTGAGCAATGGAAGGAACAGTTAGCTCACTGGTGGCGTCTGGGGTTGGAGTATGTTCATCAAGTTCCCCCTACTCAGCTCTACGTTGCTGTTGCTGTTTTGGTCTTTACGACCTTGCTTCTTCTATCAATTCGGTTGTTCAAACGTGCAAAGTCTAATACCATTGTGTTGACGGGGCTTACTGGAAGTGGAAAAACTGTTCTATTCTATCAACTTAGAGATGGATCTTCCCATCTGGGTACTGTTACATCAATGGAACCCAATGATGGCACTTTTGTTCTTCATTCTGAAACGACAAAGAAAGGCAAGATTAAACCTGTTCATGTTGTTGATGTTCCTGGGCATTCTCGTCTTCGATCCAAACTGGATGAGTACTTGCCTCAAGCTGCTGCCATAGTTTTTGTGGTTGATGCTTTGGATTTCTTACCTAACTGCCGTGCTGCTTCAGAataccTGTATGATATTTTGACGAAGGGAAGTGtggtgaagaagaagatcCCACTGCTTATTCTCTGTAACAAAACAGACAAAGTCACTGCTCATACCAAGGAGTTTATCCGCAGACAATTGGAGAAGGAAGTTGATAAATTACGAGCATCAAGAAGTGCAATATCAGATGCCGACGTTACGAATGAGTTTACCCTTGGAGTACCTGGagaaccattttctttttcccagtGCGTTAATAAAGTCACAACCGCTGAAGCATCTGGTTTGACTGGGGAGATATCACAGTTGGAACAGTTTATCAGAGAAAACGTAAAGACCTA 779 0.4031 MDEFEQWKEQLAHWWRLGLEYVHQVPPTQLYVAVAVLVFTTLLLLSIRLFKRAKSNTIVLTGLTGSGKTVLFYQLRDGSSHLGTVTSMEPNDGTFVLHSETTKKGKIKPVHVVDVPGHSRLRSKLDEYLPQAAAIVFVVDALDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDKVTAHTKEFIRRQLEKEVDKLRASRSAISDADVTNEFTLGVPGEPFSFSQCVNKVTTAEASGLTGEISQLEQFIRENVKT 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01279 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
Bva08g01279 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Bva08g01279 259 Coils Coil 190 210 - -
Bva08g01279 259 PANTHER TRANSFERRIN 3 258 - -
Bva08g01279 259 CDD SR_beta 56 255 IPR019009 -
Bva08g01279 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 193 IPR027417 -
Bva08g01279 259 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 258 IPR019009 -
Bva08g01279 259 Gene3D - 50 257 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01279 Bva-Chr8 6695937 6699297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01279 1 258 Miscellaneous Gene Families AT5G05670 72.587 1.18e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01279 K12272 - gmx:100800572 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01279 08 6695937 6699297 Bva08g01279 08 6695937 6699297 ECH