Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01233 ATGAAGTTTATGAAGCTGGGATCTCGTCCTGATACCTTCTACACTGCAGAAGCAGTAAGGTCAGTCTCTTCTGAAGTTTCCAGCGATCTCATAATTCAAGTGAAAGGAAGTAGATATCTCCTTCACAAGTTTCCCCTGCTGTCCAAATGTTTGCGGCTGCAAAGGATATGCTCAGAATCTCCTGACTCTTCCCAGTACCAAATAGTCCAGCTCCCTGATTTTCCTGGTGGAGAAGAGGCATTTGAACTCTGTGCTAAGTTCTGCTATGGTATCACTGTCACTCTTAGTGCTTACAACATTGTAGCTGCTCGATGCGCTGCGGACTACCTGCAGATGACAGAAGATGTTGAGAAGGGGAACCTAATTTACAAGCTTGatgttttcttcaattcttgtATTCTCCATGGTTGGAAGGATTCTATTGTGGCTCTACAAAGCACCAAAGCATTGCCTTTGTGGTCAGAGGACTTAGCAATCACAAGCAGATGCATTGAAGGAATTGCCTCAAAGGTCTTAAGTCACCCCTCAAAGGTCAGTTTGTCACACAGTCATTCCAGAAGGGTCAGGGACGATCTTTCTTGCAATGGGACGGAAAGTCAGAGACATAAATCAGCGAGCAAGGGATGGTGGGCTGAAGATTTAGCAGAGTTAAGCATAGACCTTTACTGGAGAACCATGATTGCAATAAAATCTAGTGCCAAGATGCCCTCGAATCTCATTGGTGATGCATTGAAAATTTATGCATCTCGATGGCTGCCTAATATCTCCAAGAATGGACGTGTCAATCAGAAAGCATCATCTGATTCTGATTCAGACTCAGCAAGTGAAATAACTTCCAAGCATCGTCTGCTTTTGGAATCAATTGTAAGCTTGCTTCCAGCAGAGAAAGGTGCTGTTTCTTCTAGTTTCCTTCTTAAACTCTTGAAGGCAGCCAATATTCTTAAtgcttcttcctcttcaaaGATGGAATTAGCTAGAAGGGTGGGACTTCAGTTGGAGGAAGCTACAGTAAATGATCTTTTAATACCTTCATTATCTTACACAAACGATACGCTGTATGATGTGGAGTTGGTGATGACCATATTGGAACAGTTCATGCTACAAGGGCAAAGTCCTCCAACAAGCCCTCCAAGATCCAGGCTGGCTGTTGAAAGGAGAAGGTCTCGTTCAGCAGAGAACATTGACTTTGAATTGCAGGAGAGTAGGAGGTCATCTTCAGCATCTCATAGTTCAAAATTGAAAGTGGCAAAGCTTGTGGATAGGTATCTTCAAGAAGTTGCCAGAGATGTGAATTTGTCCTTGTCGAAATTCATTGCTCTTGCTGAAACTATACCAGATTTTGCAAGACAAGATCATGATGATCTCTACAGAGCCATTGACATTTATCTCAAGGCTCATCAAGAACTGAACAAGAGCGAAAGGAAAAGATTATGTCGAATCCTTGACTGTAAAAAGCTGTCTATGGATGCCTGTATGCATGCTGCTCAAAATGAGCTACTCCCCCTTAGGGTAGTTGTCCAGGTTCTCTTCTTCGAGCAAGCTCGAGCAGCAAAAGCTGGAGGCAAAGTCGCTGACTTGCCAAGCAACATAAAAGCATTGCTCACTGCACATGGCATTGACCCATCAAAACATACAGCACCATTAAGCACTACCACAAGCATACATGCAGATGATCAATGGAGTGTTTCAGGATTCAAGTCACCAAAGTCTAGGACTTCAACTCTGAGGATGAAACTAGCTGAGGATGATGCAGCCTTGGATGAAAACGGTATGCCAAGGGATGGAATTGCAAGAAGTTCCAAATTTAAGGCTCTTTGTGCGCTTCCTACTCAACCCAAACGAATGCTTAGTAAGTTGTGGTTCACCAATAGAAGCACTACTGAAAAGAattg 1892 0.4244 MKFMKLGSRPDTFYTAEAVRSVSSEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQRICSESPDSSQYQIVQLPDFPGGEEAFELCAKFCYGITVTLSAYNIVAARCAADYLQMTEDVEKGNLIYKLDVFFNSCILHGWKDSIVALQSTKALPLWSEDLAITSRCIEGIASKVLSHPSKVSLSHSHSRRVRDDLSCNGTESQRHKSASKGWWAEDLAELSIDLYWRTMIAIKSSAKMPSNLIGDALKIYASRWLPNISKNGRVNQKASSDSDSDSASEITSKHRLLLESIVSLLPAEKGAVSSSFLLKLLKAANILNASSSSKMELARRVGLQLEEATVNDLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSPPTSPPRSRLAVERRRSRSAENIDFELQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNLSLSKFIALAETIPDFARQDHDDLYRAIDIYLKAHQELNKSERKRLCRILDCKKLSMDACMHAAQNELLPLRVVVQVLFFEQARAAKAGGKVADLPSNIKALLTAHGIDPSKHTAPLSTTTSIHADDQWSVSGFKSPKSRTSTLRMKLAEDDAALDENGMPRDGIARSSKFKALCALPTQPKRMLSKLWFTNRSTTEKN 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01233 630 Pfam NPH3 family 209 491 IPR027356 -
Bva08g01233 630 SUPERFAMILY POZ domain 21 115 IPR011333 -
Bva08g01233 630 PANTHER OS12G0117600 PROTEIN 1 627 IPR043454 -
Bva08g01233 630 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Bva08g01233 630 ProSiteProfiles NPH3 domain profile. 208 515 IPR027356 -
Bva08g01233 630 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01233 Bva-Chr8 6419623 6423515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01233 26 539 EF-hand Containing Proteins AT3G44820 36.162 1.91e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01233 - - zju:107428520 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01233 08 6419623 6423515 Bva08g01233 08 6419623 6423515 ECH