Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01212 ATGATGAAGGTGGAGCACCGGAATCTGAATCAGCTTCACAAAGGACGGGCACTTACTACACTTTGCATAATGTTTTTCCCAGTACTCTTGCTCACTTTGTTCTTTCCATTGGGCCATGCCGAACTTTCAACGTCGCCGGAATTCAGCATTATAAAACCTAGGCACTCACGACTTCTCAAGAGTGCTGTACTGCGTGAAACTTCATCATCTCTGCTTTCTGATCTTTGGGCTCCTTTGGAAAACCAAGGCTGGAGATGTTGTGCTGAATCTAGAAATGGTTCATCATTACCTGAAAAGTCTGAGGGCTATATCCAAGTATTTCTTGATGGAGGATTGAACCAACAGAGAATGGGGaTATGTGATGCTGTCGCTGTTGCAAAAATACTGAATGCAACTCTTGTGATCCCACACCTTGAAGTGAATCCAGTTTGGAAAGATTCAAGCTCCTTCGAGGATATATTTGACGTGGATCACTTCATTGATGTATTGAAGGATGATGTTTCTATAGTTAAAGAGCTGCCAGAAGAGTTCTCCTGGAGCACAAGGGAGTATTATGCCACTGCTATTCGGGACAACAGAATCAAAGTTGCACCTGTTCATGCATCAGCAAACTGGTATCTAGAAAATGTGTTGCCTGTCCTACAGAGTTATGGTGTTGCTGCAATCTCTCCATTTTCTCATCGCTTGAGTTTTGACAACTTGCCCATGGATATCCAACGACTGCGTTGTAAAGTCAACTTTCAAGCGCTAGCTTTTGTTCCTCACATCAGAACACTTGGAAATGCTCTTGTCAGCCGCCTTCGCCATCCTACAGGCCCGCAAGAGGCCACTGCTGCAGGAGCTAAGGAAACAGCAGGGAAATTTGTTGTACTACACCTTCGGTTTGATAAGgaTATGGCAGCTCATTCGGCCTGTGACTTCGGTGGGGGCAAAGCTGAAAAGTTGGCTCTTGCCAAGTATCGTCAGGTGATTTGGCAGGGAAGGGTTCTTAACTCGCAATTCACCGATGAAGAGTTGAGGAGCCAGGGCCGTTGCCCAATGACTCCCGAAGAGGTTGGATTGCTGCTGTCAGCTTTAGGGTTTGACAACACCACTCGTTTGTATCTTGCTTCTCACAAGGTATATGGTGGGGAGGCAAGGATTTCAGCGTTGAGAGAATTATTTCCACTGATGGAAGATAAAAAGAGCCTTGCTTCTTCTGTAGAACGTTCCCAGATTAAGGGAAAAGCTTCTCTATTAGCAGCAGTTGATTACTATGTTGGCTTGCATAGTGATATCTTCATCTCTGCTTCCCCAGGAAACATGCACAACGCATTGGTTGGACACCGAACTTATTTGAATCTGAAGACTATAAGACCAAACATGGCCTTGATGGGTCAGCTGTTCctgaacaaaaacaaaagttggTCGGAGTTCCAGCAATCGGTGGTTGAAGGTCACCAAAATAGACAAGGTCAACTCAGGCTGAGGAAGCCAAAACAGTCCATATACACATACCCTGCTCCTGATTGCATGTGCCAAGCTTA 1526 0.4469 MMKVEHRNLNQLHKGRALTTLCIMFFPVLLLTLFFPLGHAELSTSPEFSIIKPRHSRLLKSAVLRETSSSLLSDLWAPLENQGWRCCAESRNGSSLPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPHLEVNPVWKDSSSFEDIFDVDHFIDVLKDDVSIVKELPEEFSWSTREYYATAIRDNRIKVAPVHASANWYLENVLPVLQSYGVAAISPFSHRLSFDNLPMDIQRLRCKVNFQALAFVPHIRTLGNALVSRLRHPTGPQEATAAGAKETAGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFTDEELRSQGRCPMTPEEVGLLLSALGFDNTTRLYLASHKVYGGEARISALRELFPLMEDKKSLASSVERSQIKGKASLLAAVDYYVGLHSDIFISASPGNMHNALVGHRTYLNLKTIRPNMALMGQLFLNKNKSWSEFQQSVVEGHQNRQGQLRLRKPKQSIYTYPAPDCMCQA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01212 508 PIRSF UCP009360 1 508 IPR024709 -
Bva08g01212 508 PANTHER O-FUCOSYLTRANSFERASE 39 12 507 - -
Bva08g01212 508 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 12 507 - -
Bva08g01212 508 Pfam GDP-fucose protein O-fucosyltransferase 103 446 IPR019378 -
Bva08g01212 508 CDD O-FucT_plant 103 451 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01212 Bva-Chr8 6287214 6292144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01212 72 507 Miscellaneous Gene Families AT2G37980 37.556 1.21e-89 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01212 - - gmx:100817796 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01212 08 6287214 6292144 Bva08g01212 08 6287214 6292144 ECH