Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01145 ATGCAAGCTTCTCTGATCAGAACCGGGTCAGTTCCCGTCCAGGAACTGCCCGTACCCGGTTCACCTAAGGCCTTCCTATCTCGTCAAGCATCCTTCTTCGGCGATAAGATGTGCGTTAGTTCGCCAACAATTTCACTGCATTTGCACTCCTCTCTGGCCAGAAGTATTAGAAGAAACTTGTCGGAAACTGACTTGATCCGATCAGCGAGTGGGAATTTTGGTGTTCACAGGAAGTTGAATAGAGCTGCATCACGCTATTTCGCGGCGACTATACGGGATGAAGAATACCACTCGGAAAGCGAGGTAAATGGGATCCCACGCGGAAATAGTAACAGTAAAGCGAATCGCGCTGGACCTTGGCCGGAAAGTGGAATTGCGAGGGAGGAGTTGGGATTTCTCGGTGGTGGAGTAGGACACGGCGGCGATCACGTAGTCCCAACGATCACCGGCGGGAACGACGGCGATAGAATCAAAATGGGCGCGTACTATCAAGAAATGTTGAAGTCAAACCCGACGGATGCGCTTTTACTGGCAAACTACGGCAAATTTCTACACGTGGTGGAGAAAGATATGGTGAGGGCAGAGGAATTCTACGGAAGAGCGATCCTCGCGAATCCTGGAGACGGAGAATTGCTTTCGTTGTACGGAAAGCTAATATGGGAAACACAGAGAGATGAAGACAGAGCAAAATCTTACTTCGATCAGGCCGTTCATGCTGCACCCGATGACTGCGTAGTGTTGGGATCCTATGCGCACTTTATGTGGGaagcagaggaagaagaagaggaaaacgGAAAAGCGGAGGAAATGGCGACTGAGCTGATCGCTGCATTTTA 836 0.4868 MQASLIRTGSVPVQELPVPGSPKAFLSRQASFFGDKMCVSSPTISLHLHSSLARSIRRNLSETDLIRSASGNFGVHRKLNRAASRYFAATIRDEEYHSESEVNGIPRGNSNSKANRAGPWPESGIAREELGFLGGGVGHGGDHVVPTITGGNDGDRIKMGAYYQEMLKSNPTDALLLANYGKFLHVVEKDMVRAEEFYGRAILANPGDGELLSLYGKLIWETQRDEDRAKSYFDQAVHAAPDDCVVLGSYAHFMWEAEEEEEENGKAEEMATELIAAF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01145 278 MobiDBLite consensus disorder prediction 103 117 - -
Bva08g01145 278 MobiDBLite consensus disorder prediction 98 120 - -
Bva08g01145 278 Gene3D Tetratricopeptide repeat domain 152 275 IPR011990 GO:0005515
Bva08g01145 278 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 266 - -
Bva08g01145 278 Coils Coil 257 277 - -
Bva08g01145 278 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 266 - -
Bva08g01145 278 SUPERFAMILY TPR-like 161 262 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01145 Bva-Chr8 5880991 5882613 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01145 - - gmx:100788211 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01145 08 5880991 5882613 Bva08g01145 08 5880991 5882613 ECH