Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01139 ATGAGCTCATCGGCAATGGAGGAAGAAGCTCCTGATCTGCTGTGCCAGCTTGAAAACGTCCAAGGCTTAGTCGTCGCCCTCTGCGCCGTTCGCTGGAAACGCCATCAGGACGCGTTGGTAGAGTTGTCAGAACACGGCATTGTCTTGATTGTGGACGAATGCTGTTGTCTTCAGGCCAAGGTTTATCTTAAACGCGAGTTGTTTGTTCGTTATGAATATAATGCACAAGGACGGCCTCGTTTTGGAGTGAGCTTGGGACTTTTTGTAGATTGCCTAAACACATTCTCAGTTCCTGGTCAGTCAAGCTCgattcaaattcaatatcCAGGTCCTGACATGCAGGTTCTTCTGACGTCTCTAGATTCACCGGATGCAAGCATTTGTGCGGAGATCAGGACAAGGATTCCTGAGGCAGTTGCATGGAACTACAATTTTGAACCTGCTGGAACAAGTCCACTAACTTTTACTGTTAGGTCTGCAGCATTAAAGGAAGCTATCGAGGATCTTGAATGGCCAGGATCAAGCATTCAGATTATTCTACAGCCAGATCCCCCTTCTGTTATTTTAAGAGGTGAAGGCCACGGAGATTTGCAGATAGACTTAACGTATTATGTGAATACGGATCTCTTGGCGGCATTTCAGTGTGATCTTGGCGTTTCTTTCAAGTACAAATATAAGTTCCTCAGAGCAACGACCTCTAATCTACCTAGCAGTCCCATTAAAGAAAGTAGAGGAAGCAAGGTAACTGTTGGGAGAGGTGGAATGTTGAAAGTTCAGCATCTGATTTCAGTTTCCAAGTTATCTACTTCGCACCCATACGTGGATTCTATAGGCTATAAGCCGCCAGGTCGGATAGCTTATGTGGAATTCTTTGTGAAACCAGAGGAAAGTGAAGACTG 899 0.4483 MSSSAMEEEAPDLLCQLENVQGLVVALCAVRWKRHQDALVELSEHGIVLIVDECCCLQAKVYLKRELFVRYEYNAQGRPRFGVSLGLFVDCLNTFSVPGQSSSIQIQYPGPDMQVLLTSLDSPDASICAEIRTRIPEAVAWNYNFEPAGTSPLTFTVRSAALKEAIEDLEWPGSSIQIILQPDPPSVILRGEGHGDLQIDLTYYVNTDLLAAFQCDLGVSFKYKYKFLRATTSNLPSSPIKESRGSKVTVGRGGMLKVQHLISVSKLSTSHPYVDSIGYKPPGRIAYVEFFVKPEESED 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01139 299 SUPERFAMILY DNA clamp 153 262 - -
Bva08g01139 299 Gene3D - 10 296 - -
Bva08g01139 299 Pfam Repair protein Rad1/Rec1/Rad17 16 238 IPR003021 GO:0000077
Bva08g01139 299 PRINTS Repair protein Rad1/Rec1 family signature 15 32 IPR003021 GO:0000077
Bva08g01139 299 PRINTS Repair protein Rad1/Rec1 family signature 59 75 IPR003021 GO:0000077
Bva08g01139 299 PRINTS Repair protein Rad1/Rec1 family signature 282 297 IPR003021 GO:0000077
Bva08g01139 299 PRINTS Repair protein Rad1/Rec1 family signature 223 240 IPR003021 GO:0000077
Bva08g01139 299 CDD PCNA 14 262 - -
Bva08g01139 299 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD1 6 298 IPR003021 GO:0000077
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01139 Bva-Chr8 5844943 5847317 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01139 K02830 - jre:109020226 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01139 08 5844943 5847317 Bva08g01139 08 5844943 5847317 ECH