Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01134 ATGTTGATAAAAACTGTCAAAGTAAGTAATGTTTCCTTGGGAGCAACTGAGCGGGACCTTAAagagttcttttctttttctggtgATATTGAGTATGTTGAAATGCAGAGTCATGATGAGTGGTCGCAAATTGCATTTGTTACCTTCAAGGATTCACAAGGACCTGAGACTGCAGTGCTACTATCGGGAGCAACAATAGTTGATCTATCAGTTACAATAACTCCGGATCCAGATTACAAGCTTCCACCAGCTGCCCTTGCATCCGCTGCAAAGGAAAGCAAAAGTCCTGGTGGTTCTGAATCTGCTTTGCAGAAGACAGAGGATGTTGTCACCAGCATGCTGGCCAAGGGCTTTATCTTAGGCAAAGATGCTGTCAACAAAGCAAAGACTTTTGATGAGAAGCATCGGTTAACTTCAACAGCCTCAGCAAAAGTTGCATCCATTGATCAGAAAATCGGTCTCACCGAGAAAATAAGTGCAGGCGCTTCAGTTGTGAGTGGTAGAGTTCGAGAAGTGGATCAAAAGTTTCAGGTTTCAGAGAAAACCAAGTCAGCATTTGCAGCTGCTGAACAGAAGGTCAGTAGTGCAGGTTCGGCTATCATGAAGAATCGCTATGTACTCACTGGGACTTCATGGGTAGCGGGTGCTTTCAGTAAGGTTTCTAAGGCAGCTGGTGAAGTAGGACAGAAAACGAAAGAGAAAGTAGAGCACGCTGAAGAGGAACAGAAGCGAAAGGTAGAGGATCAGTATGCAGAGGTTCTATCTGAGTCCCCAAAAGCCAGTGCTACAAGTGAGCAGCATCCTTCCAAGCCTGCTCCTGCTCAGGGACGATGGGGGGAGGGAGCTGAAATTACGACAGCATTTCCCAGTTACTTAGACGaagtttg 887 0.4442 MLIKTVKVSNVSLGATERDLKEFFSFSGDIEYVEMQSHDEWSQIAFVTFKDSQGPETAVLLSGATIVDLSVTITPDPDYKLPPAALASAAKESKSPGGSESALQKTEDVVTSMLAKGFILGKDAVNKAKTFDEKHRLTSTASAKVASIDQKIGLTEKISAGASVVSGRVREVDQKFQVSEKTKSAFAAAEQKVSSAGSAIMKNRYVLTGTSWVAGAFSKVSKAAGEVGQKTKEKVEHAEEEQKRKVEDQYAEVLSESPKASATSEQHPSKPAPAQGLIL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01134 279 PANTHER BINDING PARTNER OF ACD11 1 1 265 - -
Bva08g01134 279 SMART rrm1_1 5 74 IPR000504 GO:0003723
Bva08g01134 279 MobiDBLite consensus disorder prediction 232 252 - -
Bva08g01134 279 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 265 - -
Bva08g01134 279 MobiDBLite consensus disorder prediction 256 270 - -
Bva08g01134 279 Gene3D - 3 74 IPR012677 -
Bva08g01134 279 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 76 IPR000504 GO:0003723
Bva08g01134 279 SUPERFAMILY RNA-binding domain, RBD 4 78 IPR035979 GO:0003676
Bva08g01134 279 MobiDBLite consensus disorder prediction 232 279 - -
Bva08g01134 279 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 65 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01134 Bva-Chr8 5819798 5824321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01134 - - gmx:100809613 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01134 08 5819798 5824321 Bva08g01134 08 5819798 5824321 ECH