Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01120 ATGGCTTCAAGTATGAGTACGACTGGTCCGAGCTCTGTGGCACAAGCCAATCCTCTCTGCCTTTCAAAGAAGACTATGTTTAACCTCTCTTCAGTGCCTTCTTCATCCACATTCTTCTCCACAAGCTACCCTAGGGTTTCATCTGCTTCTCCTGCGAAGCTTTGCTCGATTTCTTTGCGATCCAGTGCGAGGAACCTTGCTTGTTCTTGTTCAATCTACTCATTGAAGGTGAAAGCTAAGGAAGAGCTAGTTGACAGCGAGGATTCTTCGAGCAGTATAGCTGCTTCAGTTTCTGCTTCACGGACATTTCTCAATGCTCGCACTGAAAATGAGCTTCTGTCTGGAATCAGAAAGGAAGCAGAAGCAGGATCCCTACCGTCTAATCTTGCTATAGGGATGGAAGAGTTGTACCATACCTACAAAAATGCAGTTTTCCAAAGTGGAGATCCCAGGGCTGATGAGACTGTATTGTCAACTATGAGTGTTATATTGGATCGCGTTTACTTGGATATCATGGATCCCTTTGTCTTTCAACCATACCACAAGGCAATACGAGAACCTTTTGACTACTACAAATTTGGTCAAAATTATATTCGTCCTTTAACTGATCTCAGAAATTCTTATGTTGGCAACATTTCCCTTTTCTATGAAATGGAAGAGAAACTTAAGCAGGGACACAATATTGTCTTGATGTCAAATCACCAAACTGAAGCAGATCCTGCTATTATTGCATTGCTTCTTGAAACAGCTGTCCCATATATTGCTGAAAACCTGATCTATGTGGCTGGAGATAGAGTTATAACAGATCCTCTTTGCAAGCCCTTCAGTATGGggagGAATCTTATATGCGTTTACTCCAAAAAGCACATGTATGATCATCCGGAACTTGTAGAGATGAAAAGAAGTGCAAATACAAGAAGTTTGAAGGAAATGACTGTGCTCTTAAGGGGTGGGTCACAGATATTTTGGATTGCTCCAAGTGGTGGTAGGGACCGACCAGATCCTCTTACAGGAGAATGGGTGCCAGCACCCTTTGACGTTTCTTCGGCGGACAACATGAGAAGGCTTGTTGAACATGCTGGTCCACCTGGTCATGTATATCCTTTGGCGATATTGTGCCATGACATAATGCCCCCTCCTCGACAGgtggaaaaagaaattggggAGAGAAGAGACATCTCCTTTAGTGGCGCTGGATTATCAGCGAGTCCAGAGATAAGCTTCTCCGAAATCAGTGCCACTTGTAAAAATTCTGAAGAGGCAAAGGAGGCATATTCACAAACCCTGTACAATTCTGTTACTGAGCAATATAATGTGCTGAAATCTGCCATACATGGCCAAAAAGGATTCGAAGCATCAACTCCTAATGTCTCATTGTTACAGCCCTGGATTTA 1394 0.424 MASSMSTTGPSSVAQANPLCLSKKTMFNLSSVPSSSTFFSTSYPRVSSASPAKLCSISLRSSARNLACSCSIYSLKVKAKEELVDSEDSSSSIAASVSASRTFLNARTENELLSGIRKEAEAGSLPSNLAIGMEELYHTYKNAVFQSGDPRADETVLSTMSVILDRVYLDIMDPFVFQPYHKAIREPFDYYKFGQNYIRPLTDLRNSYVGNISLFYEMEEKLKQGHNIVLMSNHQTEADPAIIALLLETAVPYIAENLIYVAGDRVITDPLCKPFSMGRNLICVYSKKHMYDHPELVEMKRSANTRSLKEMTVLLRGGSQIFWIAPSGGRDRPDPLTGEWVPAPFDVSSADNMRRLVEHAGPPGHVYPLAILCHDIMPPPRQVEKEIGERRDISFSGAGLSASPEISFSEISATCKNSEEAKEAYSQTLYNSVTEQYNVLKSAIHGQKGFEASTPNVSLLQPWI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01120 464 CDD LPLAT_GPAT 205 440 - -
Bva08g01120 464 Pfam Acyltransferase 217 371 IPR002123 GO:0016746
Bva08g01120 464 Gene3D - 98 173 IPR038114 -
Bva08g01120 464 PIRSF G3POAT 7 464 IPR016222 GO:0004366|GO:0006650
Bva08g01120 464 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 76 463 IPR016222 GO:0004366|GO:0006650
Bva08g01120 464 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 76 463 - -
Bva08g01120 464 Gene3D - 174 455 - -
Bva08g01120 464 Pfam Glycerol-3-phosphate acyltransferase N-terminal 100 175 IPR023083 GO:0004366
Bva08g01120 464 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 100 463 - -
Bva08g01120 464 SMART plsc_2 228 374 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01120 Bva-Chr8 5726422 5734544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01120 75 463 Acyl Lipid Metabolism Gene Families AT1G32200 66.418 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01120 K00630 - gmx:100800190 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01120 08 5726422 5734544 Bva08g01120 08 5726422 5734544 ECH