Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01112 ATGTCAGGAATTACTCCAAGTTCTTTGAGGCTGAAATTGTTGAGTAGGAAtttgCAGCCAGTAAGAGACACTAGAGAGAAGCAGGTACAACTATGGAAAGGACTTATTCTAGATTACTGCagaacacaaaaaatatttattattgggCTTGAAGAAGAATTTCCTCTATTTTCAAATCCTGCTATTGAAAGGTCTCTTAGTCATGAAGCCAGAGAAGCATTTCTTTCAGCCTTGGTCTCTGAATGGCGTGCACAATGGATAGATAAAGGACACAGGAAATGCCTTATCCTTTGGCACCGGATTCAGGATTGGGCtgacattatattaaattatGTGAAAGATAATGGTTTGGAGGATGGCGTTGTGACGATAGAGGAAATACGCTCAGGGACTGAATCTCAAGGGACAGAGCTTCGTGGAATAGACCGTACTGTTTTGAATTGTGCTTTGAAACTACTAGAACAGAAGGGAAAGCTTGTCATCTTCAAGGGAACTTCTGTACAATATTTTCTATGTATTAATTCAAGGGAATATCATGTCTGTCATCAACAGCGGGTACCTTTAACTGCCTGTCTTGTTTA 581 0.3787 MSGITPSSLRLKLLSRNLQPVRDTREKQVQLWKGLILDYCRTQKIFIIGLEEEFPLFSNPAIERSLSHEAREAFLSALVSEWRAQWIDKGHRKCLILWHRIQDWADIILNYVKDNGLEDGVVTIEEIRSGTESQGTELRGIDRTVLNCALKLLEQKGKLVIFKGTSVQYFLCINSREYHVCHQQRVPLTACLV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01112 193 Gene3D - 100 169 IPR036388 -
Bva08g01112 193 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 18 167 IPR008570 GO:0000814|GO:0071985
Bva08g01112 193 Pfam ESCRT-II complex subunit 18 142 IPR008570 GO:0000814|GO:0071985
Bva08g01112 193 Gene3D - 15 98 IPR014041 -
Bva08g01112 193 SUPERFAMILY "Winged helix" DNA-binding domain 99 165 IPR036390 -
Bva08g01112 193 SUPERFAMILY "Winged helix" DNA-binding domain 18 104 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01112 Bva-Chr8 5675162 5677462 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01112 K12189 - zju:107405754 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01112 08 5675162 5677462 Bva08g01112 08 5675162 5677462 ECH