Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01109 ATGTCAGCAAGTTCAGAATCTGTGGTGTCTGTCTTGCAAAATCATGAATTCTCTTCTGGTTCACCTTCAGCTTCACATGGTTCAGGTCATAATCCTCCAAATAATCCTCCTAAGCAAGTAACTAATGAAGCAAAGAGGGCACCAGTTGTCACTTTTAATACTGTTGATAGATCTCAGAGGAAAGAAGATGAGATGGTGAAGCCAGTTTATCCAGAATATGTTGGGGtttctaaagaaaagaaaaagaagaaaataagagtttgTTACAGGTGTGGAAGAGGGAAGTGGGAAACTAAGCAGTCTTGCCTAGTTTGTGACGCCAAGTATTGCAGCAATTGTGTGCTAAGGGCAATGGGATCAATGCCTGAAGGGCGCAAATGTGTGACTTGCATTGGTGAGCCCATTGATGAATCAAAGCGTCTGAAATTGGGTAGGCATTCAAGGGTATTGTCCCGACTGTTAAGTCCCTTGGAAGTTAAGCAAATTATGAAAGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCAGAGCAGCTGATTGTCAATGGCTTCCCTCTGAAGCCAGAAGAGATGGCTGAATTACTTGGATGCCCCTTACCTCCACGGAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAATCGGGTCTCTGGGGAAAGGAAGGGGAGAAACCTGATAGAATCATAagttcaaacttaaatttcacTGGGAAACTTAGCCCCGATGCTAGTAAGGGGAACACTGAAGTTTACATCAATGGCCGAGAAATTACAAAGCTTGAATTGAGGGTACTGAAGCTGGCAAATGTCCAGTGTCCCCGTGATACACACTTTTGGGTTTATGACGATGGCCGTTATGAGGAGGAAGGTCAAAATAATATCAGAGGAAACATTTGGGAGAAGGCATCAACAAGATTTGTTTGTGCCCTTTTCTCTTTACCCTTTCCTCATGGACAACCTCATCGACCAAGAGATGAGACTAGTAATTATACTACAGTTCCAACTTATTTGGAACAAAAAAAGGTCCaaaagcttcttcttcttggacTTCAAGGATCTGGAACTAGCACTCTTTTTAAGCAGGCCAAGTTTTTGTATGGCAACAGATTCAATGCAGAAGAGTTGCAGGATGCCAAGCTGATGATCCAGAGTAACATGTACAAATATCTTAGCATTTTGCTGGATGGAAGAGAGCGATTTGAGGAGGAGGCTATTTCTAAAATGAAAGTGCAAGGTTCTCCTTGTCAAACTCTAGAACaagGTAGGGATGGTGAAGCAATTGAAGCTATTCAATGCATCTATTCCCTCAATCCAAGGCTGAAGCATTTCTCTGACTGGCTCCTGGATATTATAGCCACGGGGGATTTAGATGCATTCTTCCCTGCAGCCACACGTGAGTATGCACCTTTAGTTGAAGAAGTATGGAAGGACCCAGCAATACAagaaacatataaaagaaaagatgagcTTCACTTTCTTCCAGCTGTTTCACAGTACTTCTTAAGCCGGGCTGTTGAGATATCTAGCAATGAGTATGAGCCTTCTGAAAGAGACATACTGTATGCAGAAGGTGTTACACAGGGAAATGGTTTGGCTTTCATAGAATTCTCACTTGATGACCGTAGCCCGATGTCTGAGACTTATACAGAGAATCCGGAACAGCCCCCCCCTCTGACCAAGTATCAACTTATAAGAGTGAATGCCAAGGGGATGAACGAGGGGTGTAAGTGGGTTGAAATGTTTGAAGATGTTGGAGCAGTGGTCTTCTGCGTCGCCCTAAGCGATTACGATCAGTTGTGGATTGCCCCAGATGGCAGTGGCAGTGGCAGTGGAAGCCTTCTTCAAAACAAGATGACTCAAAGCAGGGAGCTCTTTGAGACCATGGTGAAGCACCCTTCTTTCAAAGATACCCCatttgtattgattttgaacAAATATGATATCTTTGAGGAAAAGATTAATAGGATGGCTTTAAGTGCTTGTGAGTGGTTCAACGATTTTTGCCCCGTACGTGCTCATCACAACAACCAGTCACTGGCTCATCAAGCTTACTTCTATGTTGCCATGAAATTCAAGGAACTATATGGTTCACTCACGGGTCGAAAGCTTTTTGTGTGGCAAACCCATGCAAGGGACCGAGTTACTGTCAACGAGGCATTCAAGTACATAAGAGAGGTTCTTAAGTGGGATGAGGAAAAGGAGGACAATTACTACAATGGACCCGAGGATTCATTTTACAGTACAGACGTAAGTTCCTCTCCCTATATCAGACAAAGGTA 2279 0.4168 MSASSESVVSVLQNHEFSSGSPSASHGSGHNPPNNPPKQVTNEAKRAPVVTFNTVDRSQRKEDEMVKPVYPEYVGVSKEKKKKKIRVCYRCGRGKWETKQSCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGEPIDESKRLKLGRHSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGFPLKPEEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSPDASKGNTEVYINGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFVCALFSLPFPHGQPHRPRDETSNYTTVPTYLEQKKVQKLLLLGLQGSGTSTLFKQAKFLYGNRFNAEELQDAKLMIQSNMYKYLSILLDGRERFEEEAISKMKVQGSPCQTLEQGRDGEAIEAIQCIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETYKRKDELHFLPAVSQYFLSRAVEISSNEYEPSERDILYAEGVTQGNGLAFIEFSLDDRSPMSETYTENPEQPPPLTKYQLIRVNAKGMNEGCKWVEMFEDVGAVVFCVALSDYDQLWIAPDGSGSGSGSLLQNKMTQSRELFETMVKHPSFKDTPFVLILNKYDIFEEKINRMALSACEWFNDFCPVRAHHNNQSLAHQAYFYVAMKFKELYGSLTGRKLFVWQTHARDRVTVNEAFKYIREVLKWDEEKEDNYYNGPEDSFYSTDVSSSPYIRQR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01109 759 Gene3D - 522 735 IPR027417 -
Bva08g01109 759 ProSiteProfiles G-alpha domain profile. 341 738 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva08g01109 759 CDD G-alpha 356 730 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva08g01109 759 MobiDBLite consensus disorder prediction 1 47 - -
Bva08g01109 759 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 4 754 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva08g01109 759 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 4 754 - -
Bva08g01109 759 SMART galpha_1 331 717 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva08g01109 759 SUPERFAMILY Transducin (alpha subunit), insertion domain 370 522 IPR011025 GO:0007165
Bva08g01109 759 Gene3D - 372 521 IPR011025 GO:0007165
Bva08g01109 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 339 730 IPR027417 -
Bva08g01109 759 Pfam G-protein alpha subunit 339 726 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva08g01109 759 SUPERFAMILY FYVE/PHD zinc finger 56 131 IPR011011 -
Bva08g01109 759 PRINTS Alpha G protein (transducin) signature 512 534 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva08g01109 759 PRINTS Alpha G protein (transducin) signature 639 648 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva08g01109 759 PRINTS Alpha G protein (transducin) signature 584 612 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva08g01109 759 PRINTS Alpha G protein (transducin) signature 344 359 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01109 Bva-Chr8 5659392 5664753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01109 - - gmx:100794534 1283.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01109 08 5659392 5664753 Bva08g01109 08 5659392 5664753 ECH