Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01056 ATGCCCTTCATTCTCGAACATAAACTGACTGCTGGGAAGATTGCCATGTTGCAACTGAAGGAGTTACTCCTTCAGCAGATGCTTCTTCTTTTGCCCGGGTTCAATCAAAGCCAATCACTTCAAGCTGCGGGTATACCCAAAAAGCTAGCTCCAACAATAGGCATTGCTGTTGATCATCCCCGCAAGAACCGTTCTTTGAAAAGCCTCAAGTTAAAAGTCCAGAGGCTGAAAACATACAAGGCCAAGTTGGTTGAATTCCCAAGATGTGCACGGAAGATCAAGTCTGGTGATTCGAACTTGCAAATGCTACACAAGTTCAGGGTTCATACCTGCCCATTGTTAGGGAGAAACCATCTGTTGAACTTGTTAAGGCTGAAGAAGGCCGCCGAAGCAGAAAAGGACGAAAAGAATGATGCGCTTGATTGTCCAGCACCAAGCCCAGAGAGACACTATAACAAGGAGGCTTCGAACTTAACGCTGCCATCGTCTACAAGTAGAAGTAAGCAGATCGAAGATCAATTCCAGAAATCGCAAATGGGTTTGCAGGAGGATTTTCAGCAACATGCTGAGAAAGCCAAGACTTTGCCAGAGAATACCACAAACGAAAACAAGCTTATCCTCTATGGATTGTACAAGCAAGCCACCGTTGGACCTGTCAATACCAGCCGCCCTGGAGTGTTCAACATGAGGGACAGAGCCAAATGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGACGAGGCGATGGATGATTACATCACCAAGGTGAAACAGCTTCTGGAAGCAGGCCAGGCTGCTTG 803 0.4682 MPFILEHKLTAGKIAMLQLKELLLQQMLLLLPGFNQSQSLQAAGIPKKLAPTIGIAVDHPRKNRSLKSLKLKVQRLKTYKAKLVEFPRCARKIKSGDSNLQMLHKFRVHTCPLLGRNHLLNLLRLKKAAEAEKDEKNDALDCPAPSPERHYNKEASNLTLPSSTSRSKQIEDQFQKSQMGLQEDFQQHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNMRDRAKWDAWKAVEGKSKDEAMDDYITKVKQLLEAGQAA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01056 267 SUPERFAMILY Acyl-CoA binding protein 181 262 IPR035984 GO:0000062
Bva08g01056 267 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 199 217 IPR022408 -
Bva08g01056 267 Pfam Ribosomal protein L13e 38 107 IPR001380 GO:0003735|GO:0005840|GO:0006412
Bva08g01056 267 PANTHER BNAA08G07670D PROTEIN 179 267 - -
Bva08g01056 267 CDD ACBP 181 262 IPR000582 GO:0000062
Bva08g01056 267 PRINTS Acyl-coA-binding protein signature 199 217 IPR000582 GO:0000062
Bva08g01056 267 PRINTS Acyl-coA-binding protein signature 182 197 IPR000582 GO:0000062
Bva08g01056 267 PRINTS Acyl-coA-binding protein signature 243 260 IPR000582 GO:0000062
Bva08g01056 267 PRINTS Acyl-coA-binding protein signature 222 237 IPR000582 GO:0000062
Bva08g01056 267 Coils Coil 119 139 - -
Bva08g01056 267 MobiDBLite consensus disorder prediction 133 170 - -
Bva08g01056 267 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 179 267 - -
Bva08g01056 267 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 181 266 IPR000582 GO:0000062
Bva08g01056 267 MobiDBLite consensus disorder prediction 152 170 - -
Bva08g01056 267 Pfam Acyl CoA binding protein 182 257 IPR000582 GO:0000062
Bva08g01056 267 Gene3D - 166 267 IPR014352 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01056 Bva-Chr8 5414584 5418698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01056 179 264 Acyl Lipid Metabolism Gene Families AT1G31812 72.093 3.96e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01056 K08762 - pop:18094059 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01056 08 5414584 5418698 Bva08g01056 08 5414584 5418698 ECH