Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01049 ATGGCCATGATGATGAGCCGTGGTGGAAGCAGGGTGGCCAACACTGCGTTGCTCGCAGCGGGTGCGCGCTTTTTGTCCACAGCTTCAGCAACTCGTGCCTTGGCAAGCGAGTCACTGCTGGCTGCAGCCAAGGGTTTTGGTGCTGAGGTTGGGGCTCCCAAATGGGCGAGTAGAACGAGTTTGGCGTATTGGGTTAGGGCTCCAAGCAGTGTACGGAATATGAGCACTTTGTCTTTGGAAGAGAAGCAGAACGATGAGAAGTTGGTTCAACCTGATTCAACTTCGGGCAATGCTGGTGGCAACAAAGACGAGAAGAGGGTAGTGAGTTATTGGGGCATTCAAGCCAGTAAGGTTACCAAGCCAGATGGTACAGAATGGAAGTGGAATTGCTTTATGCCATGGGAGACATACAAGTCGGATCTTTCCATTGATCTGAAGAAGCATCATGCACCAGTAACATTTATGGACAAGATGGCTTATTGGACCGTCAAAGCTCTTAGATTTCCCactgatatatttttccagAGACGTTATGGATGCCGGGCAATGATGCTTGAGACAGTGGCAGCTGTCCCTGGCATGGTTGGAGGCATGCTGCTGCACTGCAAGTCACTGAGACGTTTTGAACATAGCGGTGGCTGGATCAAAGCTCTGCTAGAAGAAGCAGAGAACGAGCGAATGCACCTGATGACATTCATGGAGGTGGCCAAGCCCAGGTGGTATGAGCGTGCCCTGATGTTTGCTGTCCAAGGTGTTTTCTTCAATGCTTACTTCTTGGGCTATCTGCTCTCTCCCAAATTTGCTCACCGAATGGTAGGGTACCTTGAGGAGGAAGCAATACACTCCTACACAGAGTTCCTCAAGGAATTGGACAAGGGCAACATAGAAAACGTCCCTGCTCCAGCCATAGCCATAGACTATTGGCAGCTGCCTCCTGACTCAACTCTAAGAGATGTGGTTATGGTGGTCAGAGCTGATGAAGCACACCACCGTGATGTCAATCACTTTGCATCGGATATACATTATCAAGGAAAAGAGTTGAGAGAGGCTCCTGCGCCAATTGGCTATCACTA 1073 0.4921 MAMMMSRGGSRVANTALLAAGARFLSTASATRALASESLLAAAKGFGAEVGAPKWASRTSLAYWVRAPSSVRNMSTLSLEEKQNDEKLVQPDSTSGNAGGNKDEKRVVSYWGIQASKVTKPDGTEWKWNCFMPWETYKSDLSIDLKKHHAPVTFMDKMAYWTVKALRFPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPRWYERALMFAVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPPDSTLRDVVMVVRADEAHHRDVNHFASDIHYQGKELREAPAPIGYH 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01049 357 Pfam Alternative oxidase 147 337 IPR002680 GO:0009916
Bva08g01049 357 CDD AOX 174 341 IPR002680 GO:0009916
Bva08g01049 357 PANTHER ALTERNATIVE OXIDASE 53 357 IPR002680 GO:0009916
Bva08g01049 357 Gene3D Alternative oxidase 104 354 IPR038659 -
Bva08g01049 357 MobiDBLite consensus disorder prediction 81 103 - -
Bva08g01049 357 PANTHER UBIQUINOL OXIDASE 1B, MITOCHONDRIAL-RELATED 53 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01049 Bva-Chr8 5370926 5372747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01049 3 357 Miscellaneous Gene Families AT3G22370 70.685 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01049 K17893 - thj:104822275 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01049 08 5370926 5372747 Bva08g01049 08 5370926 5372747 ECH