Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01048 ATGCACGTGCTAAGGTCCCCACCAATAATGGAAGAAGTCCCAGTATTTAGAAGCATCAGCACGATAGGTACGAGAGTGTTGGGGTTCGCTCCTAAACCTCATTATCAGCGTCGTGTTCGTGTTACTGGTCATCAAGCAAGGAGCTGGAGTGAGCCATTTTCAGCTGCGAGGTTGTACAAGCTTGCTTGTGTGAAGCTCTATATTTCGGGGTCAAAATCTTTGCCTTGTGATTCGATCATCGTCAGAAAGAAGTCTTGTGAGAAGCTTCTGACAGAAAGGTTTATATCTAAAATGGCTAATTACGAAGGCCAGAGAGTCACCAGTGATGTGAACTCAGGGAGTATGATTTTTGAACCTATTTTGGAAGATGGAGTCTTTCGATTTGATTGTTCTGCAAATGATAGAGCTGCAGCATATCCaagtatttcttttgtaaatagCAAAGATAGAGAGGTGCCGATCATGAGCGACAAGATTCCTACATATATCCCTACATTTGAATGCGTTCTTGGACAGCAGGTTGTCAAGCTTGAGCTGCCCGTAGGTACCTCCCTCTACGGGACTGGAGAAGTTGGTGGTCAGCTTGAGCGGACAGGGAAAAGAGTTTTCACATGGAATACAGATGCTTGGGGTTATGGTTCTGAAGCTACGTCCTTGTATCAGTCACATCCATGGGTGTTGGCTGTTCTTCCAAATGGTGAGGCACTTGGGATTCTGGCTGACACAACAAAGCGCTGTGAGATTGATCTGAGGAAAGAATCAAAAATACAGTTCATTGCTCCATCATCCTATCCTGTCATTACATTTGGTCCTTTTGCTTCACCAACTGCGGTTTTAATATCTTTATCTCATGcaattgGAACTGTGTTTATGCCCCCAAAATGGTCATTAGGCTATCACCAGTGCCGTTGGAGCTATGTTTCTGATCAGAGAGTTTTGGAGGTTGCAAGAACATTTCGGAAGAAGGGCATACCTTGTGACGTGATATGGATGGATATTGATTACATGGATGGTTTTCGCTGTTTTACCTTTGACAAGGAGCGTTTTTCAGATCCTAAATCTCTTGTCACGGACCTCCATTATAATGGCTTTAAAGCTATCTGGATGTTAGACCCTGGGATCAAAAAAGAAGATGGCTATTTTGTCTATGATAATGGTTCAAAAAATGATgtttgggtccaaaaggaagATGGAACACCTTTTGTTGGGGAAGTATGGCCTGGCCCTTGTGTTTTCCCTGACTACACACAATTGAAAGTTCGTGCTTGGTGGGCAAACTTAGTTAAAGATTTCATTTCCAATGGTGTTGACGGCATATGGAATGATATGAATGAACCAGCTATCCTTAAGGCTGTAACAAAAACAATGCCAGAGAGCAATGTTCATAGGGGAGATAGTGAACTTGGAGGTTGTCAGAATCACTCTTTCTATCACAATGTGTATGGTCTACTAATGGCAAGATCAACCTATGAAGGCATGAAACTGGGTAATGAAAATAAGCGTCCTTTTGTTCTCACCAGAGCTGGATTTATTGGCAGCCAAAGGGATGCTGCAACATGGACAGGAGATAATCTTTCAAACTGGGAGCACCTTCATATGAGTGTCTCCATGGTAATTCAGCTGGGACTCAGTGGTCAGCCACTTTCAGGGCCTGATATTGGTGGATTTGCTGGAAATGCAACACCTAAGCTTTTTGGAAGGTGGATGGGTGTAGGTGCCATGTTTCCTTTTTGCCGAGGGCATTCTGAAACTGACACTGTTGATCATGAGCCATGGTCTTTCGGGGAAGAGTGTGAAGAAGTTTGTCGATTGGCATTGAAGAGGCGCTACCGCCTGATACCACTTAtttatactcttttttatttgtctcatACAAGGGGCAATCCAGTGGCCACCCCAACTTTCTTTGCAGATCCAAAAGATCCAAACCTcaggaaaattgaaaattcatttttgttggGTCCAGTTTTAGTATATGCAAGCACCATATCCAGTAAGGGGTTAGATAAGTTGGAGTGTACTTTGCCAAAGGGAATCTGGCTGAGATTTGATTTTGGTGATGCTCATCCGGATTTACCagctttatatttaaaaggtGGCTCAATTATTCCTGTGGGTCCCCCACTTCAGCATGTTGGTGAAGCTAATTTGTCGGACGACTTAATACTTCTTGTGGCTTTAGATGAACATGGGAAAGCTGAAGGTGCTTATTTTGAGGATGATGGTGATGGATATGGCTTCACAGAAGGGGAATATTTGTTAACGCATTATGTGGCTGAACTTCATTCATCAGTTGTTACTGTCAGAGTATACAAAACAGAAGGTTCTTGGGAAAGACCTAAACGCCGCTTGCATATTCAGTTATTGCTTGGTGGGGGTGCAATGCTTGATACATGGGGACTGGATGGAGAAGACCTGCAGGTAACATTGCCTTCAGAAGAGGAGGTGTCTAAGCTGGTATCTTTCAGCGAGAGTCAACACAGAAGTTATCTGGAAAATGCAATTCAGATTCCTGATGTAGAGGAGGTTTCTGGACACAAGGGAATAGAGCTGTCAAGAACTCCCATTGAATTGAAAACTAGTAGTTGGGTTCTTAAAGTTGTTCCCTGGATAGGGGGTAGAATCATCTCGATGACGCACATTCCCACAGGAACGCAGTGGCTCCATAGCAGGCTTGAGGTGAATGGGTATGAGGAGTACAGTGGTATGGAGTATCGCTCTGCTGGGTGTACCGAGGAATATTTTGTCATTGATCGAGAACTTAAGCATGCAGGAGAGGAGGAGTCTGTTGTATTAGAGGGTGATGTTGGTGGAGGATTGGTTCTTCAGCGACAGATCTATTTTCCAAAGGATGCTCCCAATGTTTTCCGGATAGACTCTAGCATAATAGCCCGCAAAGTTGGTGCTGGTTCTGGAGGGTTCTCTAGGTTGGTATGCTTAAGAGTTCATCCGGTGTTCGCGCTCTTGCACCCATCAGAATCTTTTGTCTCATTCACTTCCATTGATGGATCGAAACATGAACTCCTGCCAGAAGTTGGGGAGCAATATTTTGAAGGGGATCTTCTTCCTAATGGTGAGTGGATGCTTGTAGATAAATGTTTTGGCTTGGCGCTGGTCAATCGGTTCAATGTTAAGGATGTCTACAAATGTCTTGTCCACTGGGGAACTGGCACAGTTAACCTTGAGCTCTGGTCCGAGAACAGGCCTGTTTCAAACAAATCGCCTCTTAGAATTTCCCATGAATACGAGGTTATAACAAGAGCATA 3266 0.4271 MHVLRSPPIMEEVPVFRSISTIGTRVLGFAPKPHYQRRVRVTGHQARSWSEPFSAARLYKLACVKLYISGSKSLPCDSIIVRKKSCEKLLTERFISKMANYEGQRVTSDVNSGSMIFEPILEDGVFRFDCSANDRAAAYPSISFVNSKDREVPIMSDKIPTYIPTFECVLGQQVVKLELPVGTSLYGTGEVGGQLERTGKRVFTWNTDAWGYGSEATSLYQSHPWVLAVLPNGEALGILADTTKRCEIDLRKESKIQFIAPSSYPVITFGPFASPTAVLISLSHAIGTVFMPPKWSLGYHQCRWSYVSDQRVLEVARTFRKKGIPCDVIWMDIDYMDGFRCFTFDKERFSDPKSLVTDLHYNGFKAIWMLDPGIKKEDGYFVYDNGSKNDVWVQKEDGTPFVGEVWPGPCVFPDYTQLKVRAWWANLVKDFISNGVDGIWNDMNEPAILKAVTKTMPESNVHRGDSELGGCQNHSFYHNVYGLLMARSTYEGMKLGNENKRPFVLTRAGFIGSQRDAATWTGDNLSNWEHLHMSVSMVIQLGLSGQPLSGPDIGGFAGNATPKLFGRWMGVGAMFPFCRGHSETDTVDHEPWSFGEECEEVCRLALKRRYRLIPLIYTLFYLSHTRGNPVATPTFFADPKDPNLRKIENSFLLGPVLVYASTISSKGLDKLECTLPKGIWLRFDFGDAHPDLPALYLKGGSIIPVGPPLQHVGEANLSDDLILLVALDEHGKAEGAYFEDDGDGYGFTEGEYLLTHYVAELHSSVVTVRVYKTEGSWERPKRRLHIQLLLGGGAMLDTWGLDGEDLQVTLPSEEEVSKLVSFSESQHRSYLENAIQIPDVEEVSGHKGIELSRTPIELKTSSWVLKVVPWIGGRIISMTHIPTGTQWLHSRLEVNGYEEYSGMEYRSAGCTEEYFVIDRELKHAGEEESVVLEGDVGGGLVLQRQIYFPKDAPNVFRIDSSIIARKVGAGSGGFSRLVCLRVHPVFALLHPSESFVSFTSIDGSKHELLPEVGEQYFEGDLLPNGEWMLVDKCFGLALVNRFNVKDVYKCLVHWGTGTVNLELWSENRPVSNKSPLRISHEYEVITRA 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01048 1088 Pfam Glycosyl hydrolases family 31 274 703 IPR000322 GO:0004553|GO:0005975
Bva08g01048 1088 Pfam Domain of unknown function (DUF5110) 721 789 IPR033403 -
Bva08g01048 1088 PANTHER ALPHA-GLUCOSIDASE 107 1085 - -
Bva08g01048 1088 PANTHER BNAA01G23630D PROTEIN 107 1085 - -
Bva08g01048 1088 SUPERFAMILY Glycosyl hydrolase domain 629 689 - -
Bva08g01048 1088 Gene3D - 612 695 IPR013780 -
Bva08g01048 1088 ProSitePatterns Glycosyl hydrolases family 31 active site. 438 445 IPR030458 -
Bva08g01048 1088 Gene3D - 700 838 IPR013780 -
Bva08g01048 1088 Gene3D glycosyl hydrolase (family 31) 141 270 - -
Bva08g01048 1088 CDD GH31_N 175 287 - -
Bva08g01048 1088 SUPERFAMILY (Trans)glycosidases 284 627 IPR017853 -
Bva08g01048 1088 Pfam Galactose mutarotase-like 184 249 IPR025887 -
Bva08g01048 1088 Gene3D Glycosidases 290 611 - -
Bva08g01048 1088 CDD GH31_glucosidase_II_MalA 287 627 - -
Bva08g01048 1088 SUPERFAMILY Galactose mutarotase-like 142 261 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01048 Bva-Chr8 5359644 5370320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01048 107 1086 Glycoside Hydrolase AT3G23640 73.061 0.0 1553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01048 - - gmx:100809690 1748.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01048 08 5359644 5370320 Bva08g01048 08 5359644 5370320 ECH