Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01045 ATGGTTATCAAACTGCTGAAAGATATGCCCCAGGAGCAGTCGGGTTCATTGAAAAGGAGCTTGTCAAGAAGGCGCTCGTTGAGGCCTGGGGTAGATACCGATGACAGGGGCTGGACGTCACTTCATGTGTTCTCTCGGAAAGGTGATATCAAAGCGGTCAAAAAACTTCTTGATGAAGGAATGGATGTAAATGCAGCTGCATGGGGCCCAAAATCAAAAGCGGTGACCCCTCTTCACCTTGCTGCTGAAGGTGGCCACATTGAAGTCATGGATGAATTGCTTGAGCGTGGTGCCAATATTGATGCCAGAATTAAGGGTGCTTGTGGCTGGACACCACTGCATATTGCTGCCAAAGAAAGGAGGAGGGAGGCGGTGAAATTCCTGGTAGAGAATGGAGCATTCTTGCCTCCTGATATGAATGATAGCCGATTTAATCCCCCTCTTCATTACTGCCCGGGACTTGAATGGGCCTATGAGGAGATGAGGCGACTTCAACTACAAGAAAACTCATCGGCGGGAGAAACCTCTTACAGCTCAGAAAGCTA 545 0.4881 MVIKLLKDMPQEQSGSLKRSLSRRRSLRPGVDTDDRGWTSLHVFSRKGDIKAVKKLLDEGMDVNAAAWGPKSKAVTPLHLAAEGGHIEVMDELLERGANIDARIKGACGWTPLHIAAKERRREAVKFLVENGAFLPPDMNDSRFNPPLHYCPGLEWAYEEMRRLQLQENSSAGETSYSSES 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01045 181 SUPERFAMILY Ankyrin repeat 33 151 IPR036770 -
Bva08g01045 181 ProSiteProfiles Ankyrin repeat profile. 36 68 IPR002110 GO:0005515
Bva08g01045 181 MobiDBLite consensus disorder prediction 10 32 - -
Bva08g01045 181 Gene3D - 10 176 IPR036770 -
Bva08g01045 181 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Bva08g01045 181 ProSiteProfiles Ankyrin repeat region circular profile. 108 133 - -
Bva08g01045 181 ProSiteProfiles Ankyrin repeat region circular profile. 73 103 - -
Bva08g01045 181 ProSiteProfiles Ankyrin repeat region circular profile. 36 65 - -
Bva08g01045 181 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 13 180 - -
Bva08g01045 181 ProSiteProfiles Ankyrin repeat profile. 108 133 IPR002110 GO:0005515
Bva08g01045 181 SMART ANK_2a 73 102 IPR002110 GO:0005515
Bva08g01045 181 SMART ANK_2a 108 141 IPR002110 GO:0005515
Bva08g01045 181 SMART ANK_2a 36 65 IPR002110 GO:0005515
Bva08g01045 181 Pfam Ankyrin repeats (3 copies) 76 133 IPR002110 GO:0005515
Bva08g01045 181 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 13 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01045 Bva-Chr8 5340802 5343349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01045 40 158 Acyl Lipid Metabolism Gene Families AT5G53470 32.773 2.37e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01045 - - aprc:113868977 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01045 08 5340802 5343349 Bva08g01045 08 5340802 5343349 ECH