Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01039 atggATGCTATACGGAAGCAAGCCAGCAAATTAAGGGAACAAGTAGCCAGGCAGCAGCAGGCTATACTTCGACAGTTAGGACAAATTAGCAATGAGCCACTTATGACTGATGAATCTGAACTTGAATGTCACCAGCAACTTCAAAAGTTATACAATTCTACAAAGACAGCAAAGCGTTTTCAACGGCATATTGTTCGTGGTGTAGAAGGTTTTATCTCCGTTCGTTCGAAGCAGATGGAGATAGTGAGGAAGTTAGCTAAAGACTGTTGTAAGTACGGGACTGAGAACCAAGGCAGTAACTTTCCCCTTGCTAGAGCTTCTCTTCATATGGGTAACTCGTTTGATTTAGTGGAAAATGAAAGGGAGACTTTGCTTGGCGTCCTCACTGGTCAGGTATCTGAGCCATTACGGGCACAAATAACAGGGGCCCCTTTGGAAGATGCACGCCACCTTGCTCACCGCTATGACAAACTTCGTCAAGAGGTAGAAGCCCAGGCTGCTGAAGTTTTGAGGCGCCGATCAAAGTTGAGGGATTCTTCTATTTCTGCAGAGAGTTCTATGAGGCTTCAAAATGCAGAAACAAGGTTTAAAGAGCTTAAATCTGCCTTGGTGGCACTTGGTAGAGAAGCAACTGCTGCTTTGTTGGCAGTTGAAGATCAACAGCAACAAATAACTCGTCAAAGCCTTTGTTCAATGGTAGATGCTGAGAGAGCTTATCATCAACATGCCCTTGTCATTCTAGAGAAGCTATATGCTGAGATGATTGTGGAGAAGCAATCAAAAGAGTATTCATCGCCTCCAGCGCCAAAAGATATACACAATCAACATACGGATGAGAATAATACTAATTCAAATGGTCTTGATCACAGAAACACCAGTAATATGGGTACCTTGTTTTTTGCGAAGGTCATACACCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGTCTATCAATTGATGATTATGTTGTGGTTCGTCAGGTTGGTCCTAATGGATGGTCTGAAGGAGAATGCAATGGCAATGCTGGATGGTTTCCCTCTGCATATGTAGAGAAACAGGATAAAATGCCAGCAAGCAAGATGTTGGAAATAACCTCGACATCGTG 1106 0.4322 MDAIRKQASKLREQVARQQQAILRQLGQISNEPLMTDESELECHQQLQKLYNSTKTAKRFQRHIVRGVEGFISVRSKQMEIVRKLAKDCCKYGTENQGSNFPLARASLHMGNSFDLVENERETLLGVLTGQVSEPLRAQITGAPLEDARHLAHRYDKLRQEVEAQAAEVLRRRSKLRDSSISAESSMRLQNAETRFKELKSALVALGREATAALLAVEDQQQQITRQSLCSMVDAERAYHQHALVILEKLYAEMIVEKQSKEYSSPPAPKDIHNQHTDENNTNSNGLDHRNTSNMGTLFFAKVIHPFDAQAEGELSLSIDDYVVVRQVGPNGWSEGECNGNAGWFPSAYVEKQDKMPASKMLEITSTS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01039 368 ProSiteProfiles Src homology 3 (SH3) domain profile. 296 355 IPR001452 GO:0005515
Bva08g01039 368 Coils Coil 1 21 - -
Bva08g01039 368 SUPERFAMILY BAR/IMD domain-like 42 254 IPR027267 -
Bva08g01039 368 SUPERFAMILY SH3-domain 298 359 IPR036028 GO:0005515
Bva08g01039 368 Gene3D SH3 Domains 282 366 - -
Bva08g01039 368 Coils Coil 145 179 - -
Bva08g01039 368 Pfam Variant SH3 domain 303 351 IPR001452 GO:0005515
Bva08g01039 368 Gene3D Arfaptin homology (AH) domain/BAR domain 28 264 IPR027267 -
Bva08g01039 368 PANTHER SH3 DOMAIN-CONTAINING 1 362 - -
Bva08g01039 368 MobiDBLite consensus disorder prediction 261 290 - -
Bva08g01039 368 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 362 - -
Bva08g01039 368 Coils Coil 189 209 - -
Bva08g01039 368 SMART SH3_2 299 354 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01039 Bva-Chr8 5307753 5311160 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01039 - - gmx:100816554 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01039 08 5307753 5311160 Bva08g01039 08 5307753 5311160 ECH