Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01038 ATGGAAACCAGACTCGTGATTCACCTTCATCACTACAATTCATCCAAAACATATTTCGGTCGTTTGCATGATGCTTTTCGTCGCTCATTGAAGCGTGTCAAGCATTTCCATTCAGCATTAGCATCCACAACCACAAGCAAAATCCAGACCCAATTAGTACCAGATAGTGGAGAGTACATTATGAACATATCTATTGGGTCTTCACCTATAGAGGCTCTTGCTATAGCTGATATAGGCAGTGATCTTATATGGGCACAATGCGTGCCATGCAAGGAATGTTACAAGCAAACACTTCCTCTCTTTAATCCTAGCCATTCCTCTTCATACCAAAAAATTCCAcgcaaatctatcttttgcAATGCTCTTCAAACAGCTACTTGTAAGGAAAATACCTGTGAATATAGTTATTCATATGGGGATAATTCTTATACCAATGGAGACCTTGCAACTGAAACTTTAACCTTTGGCATCAACAAGCCAGTTTCCTTTCCAAAAGTTGTGTTTGGGTGTGGACACGACAATGGTggaaattttgataaagaagGTTCTGGCCTATTGGGGCTTGGTGGTGGCAAACTATCACTAATTTCTCAATTGGGTGATtccattaacaaaaaattctcCTATTGTTTAGTGCCCACAGAATCTAATGTCTCAGGCAAAATAAGTTCCGGTAGCGACGCTATCACTTCTGGTTCTAGTGCTGTCACTACCCCTTTGGTCAAGCAAAGTGTTGATACCTTTTATTTCCTCACATTAGAAGCCATTAGTGTAGGGATCCAGAGAATTGCTTTCAAGGGTTCATCAAAGGCGATTACTGATGCTTATGAGGGTAATATCATCATTGATTCAGGGACAACGTTGACCTATCTGCCACCAGAGTTTATTGATGATCTAATACCAgctttggagaaaaaaaatta 923 0.3749 METRLVIHLHHYNSSKTYFGRLHDAFRRSLKRVKHFHSALASTTTSKIQTQLVPDSGEYIMNISIGSSPIEALAIADIGSDLIWAQCVPCKECYKQTLPLFNPSHSSSYQKIPRKSIFCNALQTATCKENTCEYSYSYGDNSYTNGDLATETLTFGINKPVSFPKVVFGCGHDNGGNFDKEGSGLLGLGGGKLSLISQLGDSINKKFSYCLVPTESNVSGKISSGSDAITSGSSAVTTPLVKQSVDTFYFLTLEAISVGIQRIAFKGSSKAITDAYEGNIIIDSGTTLTYLPPEFIDDLIPALEKKN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01038 307 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 11 305 - -
Bva08g01038 307 Pfam Xylanase inhibitor C-terminal 249 305 IPR032799 -
Bva08g01038 307 PANTHER OS07G0603500 PROTEIN-RELATED 11 305 - -
Bva08g01038 307 SUPERFAMILY Acid proteases 53 304 IPR021109 -
Bva08g01038 307 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 280 291 IPR001969 GO:0004190|GO:0006508
Bva08g01038 307 Gene3D Acid Proteases 225 307 IPR021109 -
Bva08g01038 307 ProSiteProfiles Peptidase family A1 domain profile. 59 307 IPR033121 -
Bva08g01038 307 Pfam Xylanase inhibitor N-terminal 59 225 IPR032861 -
Bva08g01038 307 CDD pepsin_A_like_plant 58 295 IPR034161 -
Bva08g01038 307 Gene3D Acid Proteases 35 224 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01038 Bva-Chr8 5305938 5307175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01038 24 305 Miscellaneous Gene Families AT1G77480 27.551 1.97e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01038 - - qsu:112006534 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01038 08 5305938 5307175 Bva08g01038 08 5305938 5307175 ECH