Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01011 ATGGCGAGCGAATCTGGCGTTAAATGTCCCTCGAGTTCGTCGTCAAATGCTGCGGAATCGTACATCGGAAGCTTCATAAGCCTGATTTCCAAGTACGAGATTCGTTACGAGGGTGTTCTGTATTTCCTCAACGTCCAGGATTCTACCATTGGTTTGAAGAACGTTAGGTCTTATGGAACAGAGGGGAGAAGGAAAGATGGTCCACAAGTTCCGCCAAGTGAAAAAGTTTATGAGTACATTCTTTTCCGAGGAAATGACATTAAGGATTTGCAGGTGAAGTCCCCCTCTTCCTCTTCAAAGGCAGAAGAGCAGACGTATAGTGATCCTGCTATTATCCAGTCACAGTATTCTGGGGTACCTTTATGTTCTCCTTCGCACTCAGTTGGCGGGAGAAGTGCGGCAGATTCAATTCAGAGGCATGATACTCCTGCTGCGACTAGTAGAGCGCTTACTGTTGGATTGCCTTCTCATCAAGCTGTAACCCAAGTGGGCCCGGCTGATCAAACTGCTATTACTCAAGTTGCTGGTCATCCATCTTTTTCTACATCCATGTATTGGCAAGGACACAGCGGATTATCAAGCAACAGTTCTCATTCTCTGCCACGATCTAGTTCCTTTCAATCTCCGTCGACACTGCCACCAGTTATGCATATGCAGAATAAGGTGCAAACGCCAGAAAATGGGGCACCTAAATCGGGCAGGACAACTTTATTAGAGCATGGTATTCCTACATCTTCTGCTACTGTTTCTGGTCCTGTAAATCCAGCTCGTTCACCCTCTCCTACGTCATTGCAAATTTCTGATTCTCTTGATATTACATCCCTGCTGTCCACTAAGACACCAATGCCATATCCTGTATCCATGACTTCTAGTGGATCAAAcgtgttttcattttcttcatctttccaAGATATAAACTCTAGTGAAGGTCAAATTTCTGGAAAAATTTCTCCTGACATGAGATCATTCTTTCCGGCACACACTGTCCATCATTCTGCTTCATTTGTAGATTCTACTTCAAGTCCTTTGCTAGCATCTCCATCTTTGTTGACTCTGGATCAATTTGCACAGCCTAGATCACATTTCTTTCCTCTAGCACAGAACCCGGCCCCTGATCACAGGGATATGGGTCCTCTTACACTAGCATCCTCTAGTTCCTCTGTAGTAGTTCCATCTTCAGCATCAAAAGCACCATTGCTGCCATTGCCGACTTCAGTGCAAAAGCCTCAATACTCAGCTGCACAATTTACTGAAGAGTTTGACTTTGAGGCCATGAATGAAAAGTTCAAAAAGGATGAAGTATGGAGTTCTCTTGGAAAGGCAACAGAGAAAATAGAAGGAGTAGTGGATAATGTTTCTGCTTACAGTTTGGGCCACAGAGAGGGTCAGGGGATGACACCAAACCTTCAGCCTGCATACAAGAAGGATGACTTTTTTGACACAATTTCATGTAACTCTCTGGCTCGTGGGTCAAGGAATGCACAAAATCGTTTGTCTGAGAGAATTAGGCTGGATACTGAGACATTTGGCAATTTTCAACAAAGGCCTCATATCATTGGTTATGGTGCCTATGGTGCTGGACGTGGTGAGAATCACCGTGGGTCGTATAACTGGGGAAGGGGCTATGGGTACGGTTATGGTGGGAGAGGGCGTGGTGGGAACCTGCCTTTCTA 1673 0.4447 MASESGVKCPSSSSSNAAESYIGSFISLISKYEIRYEGVLYFLNVQDSTIGLKNVRSYGTEGRRKDGPQVPPSEKVYEYILFRGNDIKDLQVKSPSSSSKAEEQTYSDPAIIQSQYSGVPLCSPSHSVGGRSAADSIQRHDTPAATSRALTVGLPSHQAVTQVGPADQTAITQVAGHPSFSTSMYWQGHSGLSSNSSHSLPRSSSFQSPSTLPPVMHMQNKVQTPENGAPKSGRTTLLEHGIPTSSATVSGPVNPARSPSPTSLQISDSLDITSLLSTKTPMPYPVSMTSSGSNVFSFSSSFQDINSSEGQISGKISPDMRSFFPAHTVHHSASFVDSTSSPLLASPSLLTLDQFAQPRSHFFPLAQNPAPDHRDMGPLTLASSSSSVVVPSSASKAPLLPLPTSVQKPQYSAAQFTEEFDFEAMNEKFKKDEVWSSLGKATEKIEGVVDNVSAYSLGHREGQGMTPNLQPAYKKDDFFDTISCNSLARGSRNAQNRLSERIRLDTETFGNFQQRPHIIGYGAYGAGRGENHRGSYNWGRGYGYGYGGRGRGGNLPF 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01011 557 SUPERFAMILY Sm-like ribonucleoproteins 20 95 IPR010920 -
Bva08g01011 557 MobiDBLite consensus disorder prediction 190 231 - -
Bva08g01011 557 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 13 552 - -
Bva08g01011 557 ProSiteProfiles TFG box profile. 493 513 IPR025768 -
Bva08g01011 557 MobiDBLite consensus disorder prediction 190 265 - -
Bva08g01011 557 Pfam Scd6-like Sm domain 21 94 IPR025609 -
Bva08g01011 557 Gene3D - 12 97 - -
Bva08g01011 557 SMART LSM14_2 15 116 IPR025609 -
Bva08g01011 557 ProSiteProfiles DFDF domain profile. 408 444 IPR025762 -
Bva08g01011 557 Pfam FDF domain 415 511 IPR019050 -
Bva08g01011 557 ProSiteProfiles FFD box profile. 471 486 IPR025761 -
Bva08g01011 557 CDD LSm14_N 18 92 IPR025609 -
Bva08g01011 557 PANTHER SCD6 PROTEIN-RELATED 13 552 - -
Bva08g01011 557 MobiDBLite consensus disorder prediction 238 265 - -
Bva08g01011 557 SMART FDF_2 414 513 IPR019050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01011 Bva-Chr8 5168665 5173052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01011 K18749 - gmx:102669894 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01011 08 5168665 5173052 Bva08g01011 08 5168665 5173052 ECH