Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01010 ATGGAGCAATTGAAGACAATCGGCAGGGAGCTCGCCATGGGCTCCCAGGGCGGGTTCGGTCAATCCAAGGAGTTCCTTGATCTGGTCAAGTCCATTGGTGAAGCTCGATCCAAAGCTGAGGAAGACAGAATCGTCCTCCATGAGATCGAAACCCTCAAGCGTCGCATCATTGAGCCTGACATTCCGAAGCGGAAGATGAAAGAATTCATCATCCGTCTCGTTTATGTGGAGATGCTTGGCCACGATGCCTCATTTGGCTACATCCACGCTGTGAAGATGACCCATGATGACAATCTCCTCCTTAAACGAACTGGCTATTTGGCTGTCACTCTTTTCTTGAACGAAGACCACGACTTGATTATTCTTATTGTAAATACTATTCAGAAGGACCTCAAGTCTGATAACTATTTGGTCGTCTGTGCTGCCCTTAATGCCGTCTGTAAATTGATCAATGAGGAGACTATCCCAGCCGTGCTACCACAGGTGATCGAGCTGTTGGGTCACTCCAAAGAGGCCGTGCGGAAGAAGGCTGTTATGGCCCTTCATCGCTTCTACCAGAAATCGCCGTCTTCTGTGTCCCATTTGGTCTCCAATTTCCGCAAGAGGTTGTGTGATAATGACCCTGGGGTAATGGGTGCCACGCTATGCCCTCTTTTTGATCTCATAACGGTTGATGTTAATTCTTACAAGGATCTCGTCATCAGCTTTGTGAGCATTCTTAAACAAGTAGCCGAGCGCAGGTTGCCAAAAAGCTACGATTATCATCAGATGCCAGCTCCATTCATtcagATTAAGTTGTTGAAAATCCTGGCATTGTTGGGAAGTGGCGACAAGGAAGCAAGCGGAAACATGTATACTGTTTTAGGCGATATAATCAGGAGGTCTGATTCATCAACTAATATAGGGAATGCTGTTCTTTACGAGTGCATATGCTGTGTCTCCTCCATATATCCCAGTCCTAAGTTGTTGGAGGGTGCTGCAGATGTCATTGCAAGATTTTTGAAGAGTGACAGTCATAATCTCAAATATATGGGCATTGATGCCCTTGGTCGGCTAATAAAGTTAAGTCCGCAGATTGCCGAACAGCATCAACTTGCCGTGATTGACTGCTTAGAGGACCCTGATGATACACTGAAGCGAAAAACATTTGAACTACTATACAAAATGACTAAGTCATCCAATGTGGAAGTGATTGTTGACCGAATGATTGATTACATGATTAATATAAGTGATGATCATTATAAAACTTACATAGCATCTCGATGTGTAGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATCCAGACCATGAATAAAGTTTTTGAGCATGCCGGAGATCTTGTGAATGTTAAAGTGGCACATAATTTGATGCGATTGATTGCAGAAGGATTTGGAGAGGAGAATGATGGTGCAGATAGTCAATTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCGTCTGTGTTTCTTCAGGTCATTTGTTGGGTTCTTGGGGAGTATGGCACAGCTGATGGAAAGTATTCTTCTCCGTATATTACGGGGAAGTTGTGTGATGTGGCAGAGGCATATTCTAATGATGAAACCGTCAAGGCATATGCAATTTCAGCAATCATGAAAATCTATGCATTTGAAATGTCAGCAAGGAGGAAATTGGATATGTTACCTGAGTGTCAATCATTGGTTGAAGAGTTGTTAGCATCTCATTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCTCTTCTTTCCTTGGATGTACAAGCTGTTGAAAGCATCATGCCACAGGATGCAAGTTGTGAAGACATTGAGGTGGATAAGGACCTTTCATTTCTAAACGGTTATGTCCGGCAGGCTCTAGAAAGTGGTGCTCAGCCCTACATTCCTGAGGATGTGCGCAGTGGAATGGAGGATATGAGCAACTTCAGAGGCCAACATCAACATGAATCTTCAACGCATGGTCTGAGATTTGAGGCATACGAACTTCCGAAGCCTCCAATGCCAACAAAAGTTTCTCCGGTTTCACTTACATCATCAACAGACCTTGTTCCTGTATCTGAGGCATTGTATTCTAGGGAGACCTACCAGAGCTCATCGATGACATCAGCATCAGAGGAAGGATCATCAGAAATTAAGCTACGACTTGATGGTGTTCAGAGGAAGTGGGGAAGGCCAACTTATTCGTCTTCAGCATCATCTACTTCAGATTCTGTGTCTCAAAAATCAGTGAATGGGGCGAGTAAGGTGGATGGTGCAAGTGTTGTTAATTCGAAAGTACGTGATAGTTATGATTCAAGAAAGCAACAGGTTGATCCAGAAAAGCAGAAGCTTGCTGCCTCATTGTTTGGGGGCTCAACTAAACAGGATAAAAGACCACCAGCAAGCCATAAGGTTCCAAAGGCTGGTGCAAATGCTGTTGACAAAACTCAGGAATTGAAGGCAGAAGTTGAAACCAATGAAGTAGCTCGTGGGAAAACGAATCATCAACCTCCTCCAGATTTGCTTGACTTGGGTGAACCAACCGTCACTAATCCTCCTCCCTCTGTGGACCCATTCAAGCAATTGGAAGGACTTCTTGACCCAAGCCTTATTTCGACAACTGATCATAGTACGAGTGCTGCTTCAAAGGCACCCGATATTATGTCACTCTATGCAGAGACAACCGCAAGTGGGCAGAGTGGCAGTGGTGGCCATTCTATCCCTCTGAGTGGGGATAGCGTAAATCTTATATCTGAGTTGGCAAGTGCAGCTGTTAGGGCTACTCCTGGGGAACCTCCGTTGCAATCTGTTAAGGGTCCACACCCGAAAGATTCATTGGAGAAGGATGCATTAGTGAGGCAGATGGGTGTGAACCCAACCAGTCAGAATCCCAACTTGTTTCGAGACTTGCTTGGCTA 2927 0.4455 MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLHEIETLKRRIIEPDIPKRKMKEFIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQVIELLGHSKEAVRKKAVMALHRFYQKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLITVDVNSYKDLVISFVSILKQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKEASGNMYTVLGDIIRRSDSSTNIGNAVLYECICCVSSIYPSPKLLEGAADVIARFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMINISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNVKVAHNLMRLIAEGFGEENDGADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSSPYITGKLCDVAEAYSNDETVKAYAISAIMKIYAFEMSARRKLDMLPECQSLVEELLASHSTDLQQRAYELQALLSLDVQAVESIMPQDASCEDIEVDKDLSFLNGYVRQALESGAQPYIPEDVRSGMEDMSNFRGQHQHESSTHGLRFEAYELPKPPMPTKVSPVSLTSSTDLVPVSEALYSRETYQSSSMTSASEEGSSEIKLRLDGVQRKWGRPTYSSSASSTSDSVSQKSVNGASKVDGASVVNSKVRDSYDSRKQQVDPEKQKLAASLFGGSTKQDKRPPASHKVPKAGANAVDKTQELKAEVETNEVARGKTNHQPPPDLLDLGEPTVTNPPPSVDPFKQLEGLLDPSLISTTDHSTSAASKAPDIMSLYAETTASGQSGSGGHSIPLSGDSVNLISELASAAVRATPGEPPLQSVKGPHPKDSLEKDALVRQMGVNPTSQNPNLFRDLLG 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01010 975 MobiDBLite consensus disorder prediction 703 853 - -
Bva08g01010 975 PIRSF AP4_epsilon 937 975 IPR017109 GO:0015031|GO:0030124
Bva08g01010 975 PIRSF AP4_epsilon 11 695 IPR017109 GO:0015031|GO:0030124
Bva08g01010 975 PIRSF AP4_epsilon 645 841 IPR017109 GO:0015031|GO:0030124
Bva08g01010 975 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 13 971 - -
Bva08g01010 975 MobiDBLite consensus disorder prediction 703 718 - -
Bva08g01010 975 MobiDBLite consensus disorder prediction 927 950 - -
Bva08g01010 975 Pfam Adaptin N terminal region 61 595 IPR002553 GO:0006886|GO:0016192|GO:0030117
Bva08g01010 975 Gene3D - 12 606 IPR011989 -
Bva08g01010 975 SUPERFAMILY ARM repeat 22 600 IPR016024 -
Bva08g01010 975 MobiDBLite consensus disorder prediction 733 761 - -
Bva08g01010 975 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 13 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01010 Bva-Chr8 5159558 5165983 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01010 K12400 - gmx:100779276 1533.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01010 08 5159558 5165983 Bva08g01010 08 5159558 5165983 ECH