Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01004 ATGGGAGGTGGAAAGGACAAGCATGATGAGTCTGATAAAGGAATTTTCTCACATCTTGCTCATGGGATGGCTCACGGTGGACATGGGTATCCTCCTGGGGCGTACCCTCCACCACCTGGGGCATACCCTCCGCATCAGGGCTACCCGCCTCAGGGGTACCCACCTCAGGGATACCCGCCACATCAGGGATACCCACCACATCAGGGATACCCACCACAACAAGGTTATCCCCCAGCAGGCTATCCTCCTGGCGCATACCCACCAGCTGGCTATCCTGGTCCATCTGCTCCACATGCTGCAGGGCATCATGGTGGTGTCACAGGGATGATTGCTGGAGGGGCTGCAGCAGCTGCTGCTGCATATGGTGCTCACCATGTCGCCCATGGCCACTATGGACACGGTGCTCCTCATATGCCCCATGGAAAATTCAAGCACGGCAAGCATGGAAAGTTCAAGCATGGGAAGCATGGAAAGTTCGGCAAGCATGGTGGCTTCAAGAAGTGGAAGTG 509 0.5639 MGGGKDKHDESDKGIFSHLAHGMAHGGHGYPPGAYPPPPGAYPPHQGYPPQGYPPQGYPPHQGYPPHQGYPPQQGYPPAGYPPGAYPPAGYPGPSAPHAAGHHGGVTGMIAGGAAAAAAAYGAHHVAHGHYGHGAPHMPHGKFKHGKHGKFKHGKHGKFGKHGGFKKWK 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01004 169 MobiDBLite consensus disorder prediction 20 84 - -
Bva08g01004 169 PANTHER GLYCINE-RICH PROTEIN A3-LIKE 1 73 - -
Bva08g01004 169 PANTHER GLYCINE-RICH PROTEIN A3-LIKE 53 169 - -
Bva08g01004 169 Pfam XYPPX repeat (two copies) 75 89 IPR006031 -
Bva08g01004 169 Pfam XYPPX repeat (two copies) 47 60 IPR006031 -
Bva08g01004 169 PANTHER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATED 1 73 - -
Bva08g01004 169 PANTHER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATED 53 169 - -
Bva08g01004 169 MobiDBLite consensus disorder prediction 31 84 - -
Bva08g01004 169 MobiDBLite consensus disorder prediction 143 169 - -
Bva08g01004 169 PRINTS Molluscan rhodopsin C-terminal tail signature 75 87 - -
Bva08g01004 169 PRINTS Molluscan rhodopsin C-terminal tail signature 49 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01004 Bva-Chr8 5123749 5125889 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01004 - - cmos:111447772 53.1434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01004 08 5123749 5125889 Bva08g01004 08 5123749 5125889 ECH