Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01003 ATGAGTTTTTCCGACGACGAGGACGAGAATTTGGCTCACTTTCTGGAATCGGAGGTTCTCTCTGAGATTTCTGATAAGGAAGTGGAAAATGTGGAGGAACCCAAAGCAAAGAGGCAGCGAGTAGAGGGTGCCGAGACTACAAAGGAAGAAACTAAAGAAAGTTTTACTTCATCATCGGGCCTTAAGAATCAAAGCGTTGTCGAAGTGATTCCCAGGAGGATTGAGACTGGATTTTTCAGTAAAATCCCTCCTGAACTTTTCCATAATATCCTTAAATTTCTCTCTTCCGAGGACCTTGTTTCATGCTCTTTGGTCTGTACGTTTCTAAACCATGCTGCTTCTGATGAAGCACTATGGCGTCGATTGTACTGTATGCGATGGGGTCTTCTCCCCCCTACCAGGAAGCTGCGAGAATGCCCAtggaaaaagttatattttcagCGTGACGGAGAGGACATGATTGAACTTGTGAGGAACTGCCAGAATGAGTTTAAAGAGTATTACATTCAAATGCAAGCAGCTAAGCGAGGCCAAGCACCTCTTCCTTCACAGTTGAAAGATGATAGTATGATTCTTGACAAAACATTAGCTGATCAAGTGTCAATGTGGAAAAGTAGCAAGGGCCTCAGTGATACAGTGGTAACTGATCATGCTTGTTCTGGAGAAACATGTTCATACCACCAAATGGGGGATGTATTTATTTGTGAGAAGACTGGACTGGTTCATGTATGCGATGACACATGCAGAGAAGTTGTCATGGATCCCACCAATATGCTTTTGGTCTGTACAATATCAGGGCACTGTTTTGATAGATTACTATCAATAGAGGAAATGGAGCCAGATGCTGAGCAGCACCAAGGTGGTGTGATGGATGAGGCAGAACCGTTCATGGGATCCGGCCGTTTTGCGCGAGCTTATATACTGGGATATAATTGTGCTGATGAAAAAGAGCTGGAAGCTACTCTGAGGTTTTGTTG 977 0.433 MSFSDDEDENLAHFLESEVLSEISDKEVENVEEPKAKRQRVEGAETTKEETKESFTSSSGLKNQSVVEVIPRRIETGFFSKIPPELFHNILKFLSSEDLVSCSLVCTFLNHAASDEALWRRLYCMRWGLLPPTRKLRECPWKKLYFQRDGEDMIELVRNCQNEFKEYYIQMQAAKRGQAPLPSQLKDDSMILDKTLADQVSMWKSSKGLSDTVVTDHACSGETCSYHQMGDVFICEKTGLVHVCDDTCREVVMDPTNMLLVCTISGHCFDRLLSIEEMEPDAEQHQGGVMDEAEPFMGSGRFARAYILGYNCADEKELEATLRFC 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01003 325 PANTHER F-BOX ONLY PROTEIN 3 269 325 - -
Bva08g01003 325 PANTHER F-BOX ONLY PROTEIN 3 69 268 - -
Bva08g01003 325 Gene3D - 63 153 - -
Bva08g01003 325 SUPERFAMILY F-box domain 67 148 IPR036047 GO:0005515
Bva08g01003 325 SMART fbox_2 82 122 IPR001810 GO:0005515
Bva08g01003 325 MobiDBLite consensus disorder prediction 25 57 - -
Bva08g01003 325 ProSiteProfiles F-box domain profile. 76 122 IPR001810 GO:0005515
Bva08g01003 325 Pfam F-box-like 80 124 IPR001810 GO:0005515
Bva08g01003 325 MobiDBLite consensus disorder prediction 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01003 Bva-Chr8 5120146 5123101 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01003 - - gmx:100778591 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01003 08 5120146 5123101 Bva08g01003 08 5120146 5123101 ECH