Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01001 ATGGACGGCGAGGAAGGAGGTGGCATAAGGCTGAGCAAGAGATTCTCCGATAAGGATGGAGAGGTTGACTACAAGACCAAGGCCGGCACAGCTTGGAGCCATTCTTATCTCAACCAGAAGCCATGGCACCCTCTCTCTTACCCAAATCAACGCCGCAAGTGGATCGCCGAGCAGACCCACGCCCAGCGCCAACGCCGTGGCGAGGAGGTTGCTCGCGAGTATGCTCAGGAGCAGGACTTCTTTCGCCAAACAGCTCTTATTTccgagaaagagaaagaaaaggtgGAACTAATGCAAGCTGTTAGCTTTATGTATGTTCGGCCCCCCGGGTACAATGCTGAAAGTGCCAAAGCAGCAGAGATGGCcgatgagaagaaaaaggaggagCTAAGTAACCCCTCCCATGTCCCAATTGCAGACGGACCCTCCTCTTCAATGCCacaagaggaaaagaagaaaccaaGGCCAAAAGATGTGTTTGGGCGTCCTTTACCAACTGAAGAAGAATTCGAAATCCTAAAAAATGCTCCACGACTGGACACAGGAGTTCATGGCAGGGTGAAACCTTTTGGAGTTGAAGTCCGCAATGTAAAATGTTTAAGATGCGGGAATTATGGCCACCAAAGTGGGGATCGTGAATGCCCCTTGAAGGATGCTATAATGCCTAGTGAAGAAAGTAGATTAAAAAGGGATGACCCCTTGAATGCTATACTTGCCCACACAGATCATAATGAGCCTTTGAAGTGGGAGCTGAAGCAAAGGCCAGGAATGAGTCCTCCTCGTGGAGGATTTAAAGCAGATGATCCTAACCAGCAGATAGTTGCCGAGGACATATTCGATGAGTATGGAGGTTTCCTTAGTGGAGGTTTTGTCCCTGAGTTATTGACCAACTTCTCTGATAAATCCAAGAagtcaaaaaagaagaaacacaaaagaaagcaGCCATTATATTCAGAAAATGAATCATCTTCAGATGATGGAGAGAGGAGGtcgaagaagaaaaaacttaaggtgaagaaaaagaagctagaTCATTCTAAGTCAACTCGATCAGACACTCCAGATTCTGATAATCATCAAAGAAAGAGCAGAGAAAAGCATTCTCATACATCAGAGGATTCTGATAGAGACAGGGATGTCCATGAATCATCTTCAGATGGAGAGAGGaggttgaagaagaaaaaacttaaggtgaagaagaagaagctagaTCATTCTAAGTCAACACGATCAGACACTCCAGATTCTGATAATCATCAAAGAAAGAGCAGAGAAAAGCATTCTCATTCATCAGAGGATTCTGATGGAGACAGGGACGTCCAAATTAGAAAGACCAGACCAAAACATTCCCATTTCCCTAAAGGTTCTGATCATCCTGGGCATGATAGGAGTAAACGTAGAAGACAAAAGCATTCTTACTCATCTGAAGATTCTGGTCCTCCGGGATATCATGGACGTCACAAGAGCATAGATGAGAGTTCTTATTCATCTGAAGATTCAGGCAGTGATTGGAACAATGGACGTATAAAGACTAGGCAAAAGCATACCTTCTCTCCGAAAGGCTCTACTGAGCATCGTAGTAGTAAGCATAGTAGAAAAAGGCATGGTCATTCATCTGAGGATTCTGGTCCTGATGGGTATCTTGGGATTCACAAGGGCAGAGATAAACTTTCTTATTCATCTGAAGATTCTGGGAGTGATAGGGATGAGCGAAGTAAGAAGCTCAGGCAAAAACATCTTCATTCACCTATAGGTTCTAATCATCCTGGACATGATAGGACTAAACATGGAAGACGTTCTCATTCCTATCAAGAGTCCGATCGTGGAAGGCACAAGAGCAGAGACGAGCATTCTTATTCTTCTGAATCTGAAGATTCTTACCATCAGAGGCAACTTAGTATTAAAGGGAGCAGCCATAAGCGTTCATCAAAAGCCCATGGTGATTCTCATAAGCATCACAGAAGTTATGTGAGCAGACATATGGGGTCTCACTCGCATTCATTAAAGAAGGCTCTTCCTGAGGGATGCCAGAACAGTGAACCCAGTCATCAACGCCATCGACGGCGTCATCATCACTCTGATTCAGATTG 2090 0.4144 MDGEEGGGIRLSKRFSDKDGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHAQRQRRGEEVAREYAQEQDFFRQTALISEKEKEKVELMQAVSFMYVRPPGYNAESAKAAEMADEKKKEELSNPSHVPIADGPSSSMPQEEKKKPRPKDVFGRPLPTEEEFEILKNAPRLDTGVHGRVKPFGVEVRNVKCLRCGNYGHQSGDRECPLKDAIMPSEESRLKRDDPLNAILAHTDHNEPLKWELKQRPGMSPPRGGFKADDPNQQIVAEDIFDEYGGFLSGGFVPELLTNFSDKSKKSKKKKHKRKQPLYSENESSSDDGERRSKKKKLKVKKKKLDHSKSTRSDTPDSDNHQRKSREKHSHTSEDSDRDRDVHESSSDGERRLKKKKLKVKKKKLDHSKSTRSDTPDSDNHQRKSREKHSHSSEDSDGDRDVQIRKTRPKHSHFPKGSDHPGHDRSKRRRQKHSYSSEDSGPPGYHGRHKSIDESSYSSEDSGSDWNNGRIKTRQKHTFSPKGSTEHRSSKHSRKRHGHSSEDSGPDGYLGIHKGRDKLSYSSEDSGSDRDERSKKLRQKHLHSPIGSNHPGHDRTKHGRRSHSYQESDRGRHKSRDEHSYSSESEDSYHQRQLSIKGSSHKRSSKAHGDSHKHHRSYVSRHMGSHSHSLKKALPEGCQNSEPSHQRHRRRHHHSDSD 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01001 696 MobiDBLite consensus disorder prediction 298 696 - -
Bva08g01001 696 PANTHER CBF1 INTERACTING COREPRESSOR CIR 10 385 IPR040014 GO:0003714
Bva08g01001 696 MobiDBLite consensus disorder prediction 118 133 - -
Bva08g01001 696 MobiDBLite consensus disorder prediction 405 462 - -
Bva08g01001 696 MobiDBLite consensus disorder prediction 634 666 - -
Bva08g01001 696 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 42 77 IPR019339 -
Bva08g01001 696 MobiDBLite consensus disorder prediction 114 164 - -
Bva08g01001 696 SMART Cir_N_3 41 77 IPR019339 -
Bva08g01001 696 MobiDBLite consensus disorder prediction 251 270 - -
Bva08g01001 696 MobiDBLite consensus disorder prediction 146 164 - -
Bva08g01001 696 MobiDBLite consensus disorder prediction 314 332 - -
Bva08g01001 696 MobiDBLite consensus disorder prediction 534 576 - -
Bva08g01001 696 MobiDBLite consensus disorder prediction 345 391 - -
Bva08g01001 696 MobiDBLite consensus disorder prediction 598 624 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01001 K06066 - gmx:100500135 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01001 08 5113371 5117571 Bva08g01001 08 5113371 5117571 ECH