Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00997 ATGGTCCCCAAACCCATCATAGTAACAACAACACCGGCATCCTCTGCAACTCCTCGTGTACCGATCTTTAAGAATTCCTCTGTcagaacagaaaagaaaacccaGACCCAAAACGTCCAAAGCACCTCAACACAAACATTAACTCCTCCTCCACCCCTCACTACCACCACCCAAAAACCAATCTCAGATGCACCCGCTGCAACTTTAGTCAAGAAGAAACCAGTGACTTTAGGACAAAGGGAGGGGAGGAGACCAGCAGAACTATCAGTACCTGCATTGGTTTTGAATGCATTTGATGATATCATCAACAACTTCATAGACCCTCCTGTGAAGCCTTCTGTGGATCCAAGAAAGGTCCTTTCACAGAATTTTGCTCCTGTTGAAGAGCTACCTCCAACTGAGTGTGAAGTCATAGAAGGATCACTACCACCTTGTCTTGATGGAGCTTATATCCGCAATGGTCCTAACCCACAGTTCCTTCCTCGGGGACCTTACCACCTCTTTGATGGCGATGGCATGCTTCACTCTATTCGAATTTCTCAAGGCAAAGCAACACTCTGCAGCAGATATGTTAAGACctataaatacaatattgaaaatgaagttGGGTATCCTCTTATCCCAAATGTGTTCTCAGGCTTCAATGGCCTTGTTTCCTCTGCAGCTCGTGGTTCTCTCACGGCTGCTCGAGTGCTAACGGGTCAATACAACCCCATCAATGGCATTGGCTTAGCAAACACCAGTTTGGCTCTCATTGCCAACCGTCTCTTTGCACTAGGAGAGTCTGATCTTCCTTACATGGTGAATCTGACTTCAAATGGAGATATTGAAACTCTGGGTCGCCATGAttttaatggcaaacttgccCTAAGCATGACCGCACACCCCAAGTTAGACCCTGAAACTGGTGAGACCTTTGCTTTCCGTTATGGCCCTGTGCCTCCTTTCCTCACCTACTTCCGCTTCGATTCAAATGGAAACAAACAACCAGAAGTGCCTGTTTTCTCCATGATCCGCCCCTCATTCCTCCATGACTTCGCCATCACCAAAAAATATGCCATTTTTGCAGACATTCAAATAGGAATTAACCCAATTGAGATGATCGCCGGTGGCTCCCCAGTGGGTACAGACCCATCGAAAGTTTCCAGGATTGGAGTCCTACCTCGATACGCCACAGACGAGTCCCAAATCAAGTGGTTCGATGTGCCAGGATTCAACATCATCCACGCCATTAATGCTTGGGATGAAGATGATGGAAATTCAGTAGTCATAGTAGCACCCAACATCTTATCAGTGGAGCACACGCTAGAGAGAATGGAACTCATCCATGCTATGGTAGAGAAGGTGAGGATCAACCTCAGAACTGGGATTGTCACAAGGCAACCAATTTCAGCTAGAAACCTTGATTTCGCGGTAATTAACCCGGCATTTGTTGGGCGAAAGAACAAATTCGTATATGCAGCTGTTGGAGACCCAATGCCCAAGATTTCAGGGGTGGTAAAGTTGGACGTGTCGAAAGAGAAGGAGCGCCGGGACTGCACGGTGGCTTGCCGGATGTTCGGAGAAGGGTGTTATGGGGGTGAGCCATTTTTTGTGGCGAGGGAACCAGAGAACCCAGAAGCAGAGGAAGATGATGGGTATGTGGTTTCGTACGTGCACGATGAGAACAAGGGAGAGTCAACGTTCTTGGTGATGGATGCTAAGTCGACGGAACTTGAAATAGTGGCGGCTGTGAAGCTTCCCAGGCGAGTGCCATACGGTTTTCATGGACTCTTTGTGAGGGAAAGTGACCTCGTGAAGCTGTA 1805 0.4632 MVPKPIIVTTTPASSATPRVPIFKNSSVRTEKKTQTQNVQSTSTQTLTPPPPLTTTTQKPISDAPAATLVKKKPVTLGQREGRRPAELSVPALVLNAFDDIINNFIDPPVKPSVDPRKVLSQNFAPVEELPPTECEVIEGSLPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHSIRISQGKATLCSRYVKTYKYNIENEVGYPLIPNVFSGFNGLVSSAARGSLTAARVLTGQYNPINGIGLANTSLALIANRLFALGESDLPYMVNLTSNGDIETLGRHDFNGKLALSMTAHPKLDPETGETFAFRYGPVPPFLTYFRFDSNGNKQPEVPVFSMIRPSFLHDFAITKKYAIFADIQIGINPIEMIAGGSPVGTDPSKVSRIGVLPRYATDESQIKWFDVPGFNIIHAINAWDEDDGNSVVIVAPNILSVEHTLERMELIHAMVEKVRINLRTGIVTRQPISARNLDFAVINPAFVGRKNKFVYAAVGDPMPKISGVVKLDVSKEKERRDCTVACRMFGEGCYGGEPFFVAREPENPEAEEDDGYVVSYVHDENKGESTFLVMDAKSTELEIVAAVKLPRRVPYGFHGLFVRESDLVKL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00997 601 Pfam Retinal pigment epithelial membrane protein 126 593 IPR004294 GO:0016702
Bva08g00997 601 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 23 599 - -
Bva08g00997 601 PANTHER BETA-CAROTENE DIOXYGENASE 23 599 IPR004294 GO:0016702
Bva08g00997 601 MobiDBLite consensus disorder prediction 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00997 Bva-Chr8 5079365 5081522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00997 K09840 - gmx:100777875 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00997 08 5079365 5081522 Bva08g00997 08 5079365 5081522 ECH