Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00987 ATGGGACTTCTGCAGCTCTTCGTTGTTGCCTCTAATCCGGTGATTAAAGTGTTGCTGGTGACTGCACTTGGCTTATTTCTTGCACTGGATCGCATAAATATATTGGGAGAAGATACAAGGAGACTAGTGAATCATAttgtattttatgtgtttaatCCTGCACTGGTTAGCAGCAACTTAGCCAAAACAATCACTTATGAGAGTGTTGCTTCGTTGTGGTACATGCcagtcaatatttttattacatttctaATAGGCTCGGCGCTGGGATGGGTGCTTATTAAAATCACAAAGGCTCCCAAACGCTTGCAAGGATTAATACTGGGTTGTTGTGCAGCAGGAAATCTTGGAAACTTGCCCATAATTATAGTTCCTTCGGTATGCAAAGAGAAAGGCAGTCCTTTTGGAGATCCTGATGTCTGCTATAAATATGGGATGGCTTATGCGTCGCTTTCCATGGCGACTGGAAATCTTTTAATATGGTCCTACGTTTTCAACTTAATGCGGATTTCCTCAAGGCAAGAAGCTAATATCAGTCTTGACTCCCCCAAGTTGAAAGAACCACTCGCAGAGAAATGCTCAGAAACTCCTAGTTCTGCACATGACACCTCGGATGATGCATATACCCTTCTGCTTCCTCACACAGGATCTGAGCCTCAGGAAGAAGTTCAGGTACCGCTCTCGCATAAAATTAAGCACTACCTGAAGATGATTccaagtaatttaaatttgaagacCATCTTTGCGCCACCAACTCTTGGAGCGGTTTCTGGTTTTATCATTGGTGTAGTCTCCCCAGTTCGTAGTTTATTGATTGGGAGTGATGCTCCACTTCGTGTGATCACAGAATCTGCTGAAATGCTAGGTGATGCATGCATCCCAACTGTTACCCTGATATTGGGTGCAAACCTCCTCAAAGGGTTGAAAGGAACAGATCCTCTCTACCAGTTcatgcttcttcttcaattcACAGTTCCACCAGCCATGAGTATAGGAACAATAGCTCAATTGTTCGGAGCTGGTCAGAGTGAATGTTCGGTTATCATGCTATGGACATATGCTTTGGCATCAATTGCCATGACCCTTTGGTCAACCTACTACATGTGGATGCTGTCCTA 1118 0.4132 MGLLQLFVVASNPVIKVLLVTALGLFLALDRINILGEDTRRLVNHIVFYVFNPALVSSNLAKTITYESVASLWYMPVNIFITFLIGSALGWVLIKITKAPKRLQGLILGCCAAGNLGNLPIIIVPSVCKEKGSPFGDPDVCYKYGMAYASLSMATGNLLIWSYVFNLMRISSRQEANISLDSPKLKEPLAEKCSETPSSAHDTSDDAYTLLLPHTGSEPQEEVQVPLSHKIKHYLKMIPSNLNLKTIFAPPTLGAVSGFIIGVVSPVRSLLIGSDAPLRVITESAEMLGDACIPTVTLILGANLLKGLKGTDPLYQFMLLLQFTVPPAMSIGTIAQLFGAGQSECSVIMLWTYALASIAMTLWSTYYMWMLS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00987 372 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 311 - -
Bva08g00987 372 PANTHER - 1 311 IPR045033 GO:0080162
Bva08g00987 372 PANTHER - 310 371 IPR045033 GO:0080162
Bva08g00987 372 Pfam Membrane transport protein 318 363 IPR004776 GO:0016021|GO:0055085
Bva08g00987 372 Pfam Membrane transport protein 11 308 IPR004776 GO:0016021|GO:0055085
Bva08g00987 372 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 310 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00987 Bva-Chr8 5029464 5032849 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00987 K24139 - gmx:100817605 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00987 08 5029464 5032849 Bva11g01461 11 14165827 14170283 BWGD
Bva08g00987 08 5029464 5032849 Bva08g00987 08 5029464 5032849 ECH