Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00954 ATGTTCGTCAAGAAGCTCGTCGAGAAAGCTTCCATAAAGAAGCCTGGAGGAATATCAGATGGATTAAAAGCTAGTGAAGTGGACCCACGTATAGTATTTCATTGTGGGGTCCCATCAACTGCTACCAAGTTCGCTTATGACAATATTCAGAAGATTCTGGCTATTTCTACTAGAGATGGCCGAATTAAGCTGTATGGAAAAGATAACATTCAAGCCCTACTTGAATCTAGAGATCCAGTGCCTAGCAAGTTTTTACAGTTCATACAGAACCAAGGCATCCTGGTAAATATCACTTACAATAACCATATTGAGGTTTGGGACATAGACAAGAAACTGTTAGTTGATGTGCACATTTTTAAAGATGATATTACAAACTTTGCAGTTATTAAACATAGCCTCTTTATGTATATTGGACATTCTTGTGGCAATGTTTCAGTTTTAAAGCTTGAACGGGAACCATGGCATTTAGTACAGATGAAATACACCATACCTATCTCAGCTTCTCATGGGAGTTCGTCTGAAGTGTCTGATGATACTGCTGTAACACACATACTGCCTCAACCAGCAGCTGAGAGCAAGAGGGTTCTCATAATCTTTAGAAATGGCCAAATTATATTATGGGATATTAGAGAAAGCAAATCTATTTTCAGAACTGGTGGAAACATGTCTCAACCAATTTTTAATGAAGCAAAGAAAGTTACTGCTGCATGTTGGGCGTGTCCATTTGGAAGTAAAGTGGTTGTAGGGTACAACAATggagaaattttcatttggagCATCCATTCTCCGAGCACAAAAACTGATTCGACATCTGATTATAGCAGTCAAAACACTCCTATGTTCAAGCTTAACCTGGGATATAAATCAGATAAAATTTCCATAGGGGCAGTAAAATGGATTTATGCAGATGGCAAGGCATGTCGACTATATGTCATGGGAGATTCGGACAGTGTATCTTCAAACTTGTTGCAGCAGGTGGTATTACTGAATGAGCACACTGAATCACGCACAATAAAGTTGGGCCTTAATTTGTCTGAGTGTTGTGTTGATATGGAGATTATTTCAACTTCAAGCGAACAAAACAAGCATAAACAagattctttccttttgcttgGGAAATCaggacaaatatatatgtttgacgACTGTTTGATCGAAAGGTATCTTGTACAGTGCCAGTCTAGGTCCACACCCTCACTACCAAAGGAAGTGATTGTTAAGTTGCCATTGGCAGATTCAAGTATTACCACAGCTAAATTCATCTCAGATAATCCCTGCATGGTGATTCCAGATGAGGATTACATTCAGCTGGTCAACAATTATCCACAGCTTATTCCCATGGaggcaaaacaaaaagatgcgATTAGCCTGAGTTCTGCAAACTTTACTGGATTTTCAAAGGTTAAAAACTTGTACATAACTGGACATATAAATGGAGCTGTCACTTTCTGGGATGCATCCTGTCCATTTTTCATTCCAATTTTGCAAATAAAGCAACAGAGTGAAAATGACTTTTCTTTAAGTGGTATAGCCCTGACAGCGTTATGTTTTGATATCAACTTTCCGCTTCTTGTTTCTGGAGACCAGAATGGAACGGTTCgcatatttaaattcaaacctGAACCATATGCTACAACCAGCTTCATGTCTCTTACTGGAGGTACAAAGAAAGGGACCGATCATATAATCCAGAGTGTGAAACTCGTAAAAACCAATGGTGCTGTACTTTCATTGAACACAGATCACAGCTCAAGATATCTTGCTGTTGGTTCTGAACAAGGATATGTTTCTGTGATTGACATGGAAGGCCCCACTGTGTTATATGAGAAACACATAGCAAGTGAAATTTGTACTGGCATAATCTCTCTCCAGTTCCAAACCTCTAGTGTGCAAGGTTTTGAGAAGAACATTTTAGCAGTTGGAACAAAGGACTCGTCTGTTTTGGCACTTGATTTTGAAACTGACAACACACACAGCACTGGCACGGTTCATCCTAAGAAACCCTCAAAGGCTCTATTTATGCAGGTTTTGGATGGACAAGGCGAATCAACCATTTTGCTATGTTCTGAGAAatctttgtatatttattcTCTAGAGCATGTTGTTCAGGGAATTAAAAAGGTTCTCCACAAGAAGAAGTTTCAGTCCTCTTGCTGTTGCTGGGCAGCATCATTTTACAGCCCCTCTGGTCTTGGGCTCATACTCCTCTTTACGACtggaaaaatagaattaaGGTCCTTGCCAGAATTAACCCTGATAGAGGAGACTTCAATCAGAGGTTTCACATATTCTCCTCCAAAATTGAAGTCATTTTCTGATACCCAAATATGCTGTTCGTCTGGAGGAGATCTCGTTTTGGCGAACGGCGACCAGGAAATTTTTGTTGTCTCATTATTGGCTCAAAGAACCATTTTCAGGCTTTTAGACAGTGTCAGCTGCATCTACAGGAAAGATAGGGTGCAATCACTAGAAGAACTTGGCCCTGTCATccataaggaaaagaaaaagGGTATATTCAGCTCCGTTATTAAAGATATTACTGGCAATAAAGAAAAGCATGTGCCCATCGTGGAAACAGAAGATTCTAATGAAAGTATCCAAGAACTCTCAGCTATCTTTTCAAATGCTAATTTCCCATGTGAAGCTGAAAATACAGATAAGCTGACCGTGGATGAAGATGAGCTGGAATTGAACATAGATGACATTGACCTAGAAGATCCTGGAGAAAAACgcaaagaacaaaatatattggGAGCTctaaataagaagaaattggCTGGCAAATTTCAGGCTCTAAAAGGAAGGttgaaagagaggaaaagcAACTCCCAGGAAACATCGGGTAAGAAAGAGCAACAGGACGAAAAAGTGGGTGCAgttgatcaaattaaaaggagaTATGGGTTCTCTTCATCCAGCGAAACAAGCGCTGCTAAATTGGCAGAAAGCAAGCTGCAGGAGAACGTGAAGAAGTTACAGGGTATCAACCTTCGAGCTACAGAGATGCAAGATACAGCAAgatcattttcatcattggCAAAACAAGTGTTGCGAACTGCTGAACATGATAGACAAAGTTG 3080 0.3718 MFVKKLVEKASIKKPGGISDGLKASEVDPRIVFHCGVPSTATKFAYDNIQKILAISTRDGRIKLYGKDNIQALLESRDPVPSKFLQFIQNQGILVNITYNNHIEVWDIDKKLLVDVHIFKDDITNFAVIKHSLFMYIGHSCGNVSVLKLEREPWHLVQMKYTIPISASHGSSSEVSDDTAVTHILPQPAAESKRVLIIFRNGQIILWDIRESKSIFRTGGNMSQPIFNEAKKVTAACWACPFGSKVVVGYNNGEIFIWSIHSPSTKTDSTSDYSSQNTPMFKLNLGYKSDKISIGAVKWIYADGKACRLYVMGDSDSVSSNLLQQVVLLNEHTESRTIKLGLNLSECCVDMEIISTSSEQNKHKQDSFLLLGKSGQIYMFDDCLIERYLVQCQSRSTPSLPKEVIVKLPLADSSITTAKFISDNPCMVIPDEDYIQLVNNYPQLIPMEAKQKDAISLSSANFTGFSKVKNLYITGHINGAVTFWDASCPFFIPILQIKQQSENDFSLSGIALTALCFDINFPLLVSGDQNGTVRIFKFKPEPYATTSFMSLTGGTKKGTDHIIQSVKLVKTNGAVLSLNTDHSSRYLAVGSEQGYVSVIDMEGPTVLYEKHIASEICTGIISLQFQTSSVQGFEKNILAVGTKDSSVLALDFETDNTHSTGTVHPKKPSKALFMQVLDGQGESTILLCSEKSLYIYSLEHVVQGIKKVLHKKKFQSSCCCWAASFYSPSGLGLILLFTTGKIELRSLPELTLIEETSIRGFTYSPPKLKSFSDTQICCSSGGDLVLANGDQEIFVVSLLAQRTIFRLLDSVSCIYRKDRVQSLEELGPVIHKEKKKGIFSSVIKDITGNKEKHVPIVETEDSNESIQELSAIFSNANFPCEAENTDKLTVDEDELELNIDDIDLEDPGEKRKEQNILGALNKKKLAGKFQALKGRLKERKSNSQETSGKKEQQDEKVGAVDQIKRRYGFSSSSETSAAKLAESKLQENVKKLQGINLRATEMQDTARSFSSLAKQVLRTAEHDRQS 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00954 1026 SUPERFAMILY WD40 repeat-like 463 802 IPR036322 GO:0005515
Bva08g00954 1026 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 684 - -
Bva08g00954 1026 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 685 1025 - -
Bva08g00954 1026 Gene3D - 430 703 IPR015943 GO:0005515
Bva08g00954 1026 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 684 - -
Bva08g00954 1026 Gene3D - 34 305 IPR015943 GO:0005515
Bva08g00954 1026 SMART WD40_4 559 600 IPR001680 GO:0005515
Bva08g00954 1026 SMART WD40_4 219 259 IPR001680 GO:0005515
Bva08g00954 1026 SMART WD40_4 26 66 IPR001680 GO:0005515
Bva08g00954 1026 SMART WD40_4 401 485 IPR001680 GO:0005515
Bva08g00954 1026 SMART WD40_4 498 537 IPR001680 GO:0005515
Bva08g00954 1026 MobiDBLite consensus disorder prediction 933 962 - -
Bva08g00954 1026 Pfam Lethal giant larvae(Lgl) like, C-terminal 702 804 IPR013905 -
Bva08g00954 1026 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 685 1025 - -
Bva08g00954 1026 SUPERFAMILY WD40 repeat-like 40 602 IPR036322 GO:0005515
Bva08g00954 1026 CDD R-SNARE_STXBP5_6 962 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00954 Bva-Chr8 4836328 4848462 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00954 - - gmx:100811900 1515.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00954 08 4836328 4848462 Bva08g00954 08 4836328 4848462 ECH