Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00946 ATGATGGAGAGGGCAGATTCTGGGCAGAAGCTGTACACACGTATGCGGCTTTGGGAATTCCCGGATCAGTATGTCATTGAGCCCACGGATGGCTCCTCTGGTTCTTCGTTGGTAGTCAGCCGAGTGGATGGATCAATGAAGCTCATAGATGAGATTCCGCAAAGCAGCTCCCTTCGAGTTCCCAAGATTTGGACAATTTTCGGCGTGGTTGGGATGTTAAGGCTTTTGGCTGGATCATATCTACTGGTTATAACCGAGCGTGAATGTGTGGGATCGTACTTGGGGCATCCAATTTACAAAATTGCATCCATGAAGGTTTTTCCATGTGATCATTCTCTAAATAGTACCTCTGCTGAACAGAAGAAGACAGAGGTGGAGTTTTCTGGGCTGCTAAATATTGCAGAGAAGACTGATGGTCTGTACTTCTCATATGACGCCAATTTAACCCTGAGTGCCCAGCGATTGAATGACCTGGGCGATGAATCAAGACTGCTTCCTCTTTGGAGACAGGCAGAGCCGCGTTTTCTATGgaacaattatattttggaaGTGCTCATAGATAACAAGCTTGATCCATACTTACTCCCCGTAATCCAAGGCAGTTTTAATCACTTTCAATCAGCCATTGGGAAGGACATTATTGACATCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGCTATGTCGCTAATTTTGTGGAAAGTGAGCAAATTTTGCAGTTGAATGGCTATACAGCGTCATTTGTTCAGGTTCGTGGTTCGATCCCTTTGCTCTGGGACCAAATTGTCGACTTGACATATAAACCCAAGTATGAATTATTGAAGCTTGAGGAAGCTCCTCGAGTCATGGAGCGCCATTTCCTAGacctaagaaaaaaatatggggCTGTTTTAGCTATTGATCTTATCAACACGCATGGAGGTGAGGGCCGGTTGTGTGACAAATTTGGAGAAACCATGCAGCATGTTAGTAGTGATGATGTAAGATATCTGCACTTTGATTTCCATCATATCTGTGGGCACGTTCATTTTGACCGCCTCTCTATTCTTTACGAGCAAATTTCTGATTTCCTTGACAGAAATGGATATCTTCTGTTGAATGAAAAAggtgaaaaaatgaaagagcagCTTGGAGTTGCCCGGACCAATTGTATTGATTGCCTAGATCGTACAAATGTAACTCAGAGCATGATTGGCAGAAACATGTTGGAAAACCAGCTTAGAAGGCTTGGTATCTTTGGTGCTGAAGAAACCATTAGTTCACATCCAAATCTTGATGACAAATATAAGATTCTGTGGGCTAATCATGGAGATGATGTAAGCATTCAATATTCTGGCACTCCTGCTTTAAAAGGAGACTTTGTGAGATTTGGGCACCGCACAATTCAAGGGATACTAGCCGATTTTTGGAATGCCCTCATGCGgtattatttgaataatttttgcGATGGAACAAAGCAGGATGCAATTGATCTTCTGCAAGGACATTACATAGTTTCTGTCACTCGGGATATGGCTCCCTCTTCACAGAAAGGGGGCATTGAATCTATAGCTTCCTTTCCTCTGGCTCTGTCTCTGGTTCTGATCGGATTCTTTTTTGCAACCATGTCATTGAGGCAAGTTCGATATGATTTTCGGCACTTCTTCTTTTCGCTGATGTGGGCAAGCATTAGCGTGGGTATAGCAGCATTTGTGAAGGCCAATGGCAGGGTTTTCTGCAACAGGCCTCGCTTACACAAGCCACGCTGTTG 1790 0.4235 MMERADSGQKLYTRMRLWEFPDQYVIEPTDGSSGSSLVVSRVDGSMKLIDEIPQSSSLRVPKIWTIFGVVGMLRLLAGSYLLVITERECVGSYLGHPIYKIASMKVFPCDHSLNSTSAEQKKTEVEFSGLLNIAEKTDGLYFSYDANLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYILEVLIDNKLDPYLLPVIQGSFNHFQSAIGKDIIDITLIARRCTRRNGTRMWRRGADPDGYVANFVESEQILQLNGYTASFVQVRGSIPLLWDQIVDLTYKPKYELLKLEEAPRVMERHFLDLRKKYGAVLAIDLINTHGGEGRLCDKFGETMQHVSSDDVRYLHFDFHHICGHVHFDRLSILYEQISDFLDRNGYLLLNEKGEKMKEQLGVARTNCIDCLDRTNVTQSMIGRNMLENQLRRLGIFGAEETISSHPNLDDKYKILWANHGDDVSIQYSGTPALKGDFVRFGHRTIQGILADFWNALMRYYLNNFCDGTKQDAIDLLQGHYIVSVTRDMAPSSQKGGIESIASFPLALSLVLIGFFFATMSLRQVRYDFRHFFFSLMWASISVGIAAFVKANGRVFCNRPRLHKPRC 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00946 596 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Bva08g00946 596 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
Bva08g00946 596 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 595 IPR030069 GO:0052866
Bva08g00946 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00946 Bva-Chr8 4796527 4805918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00946 2 595 Acyl Lipid Metabolism Gene Families AT3G51460 73.993 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00946 K21797 - gmx:100796999 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00946 08 4796527 4805918 Bva11g01425 11 13989690 14000327 BWGD
Bva08g00946 08 4796527 4805918 Bva08g00946 08 4796527 4805918 ECH