Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00941 ATGTGGTGCAGACGGTGGACCATTCGTAAACGGCAGCGTTTTCTCCTCTCCTTCTCCGTGCATGCTCTCAGCTTCCCCACACATTGGCAATACGAGGTTAACGGCTATCAATTTTCAGATTGTGCGTGTAAACCAATGGAAACTAGCAGCACAATGGCAACAAGTGAAGGTGATGATGGTGAAGTGACAAAAAGTCATGTCGAAGACTCTTCTAAATCTGACGAGCAGTTCTCTGATTTGCATCAtagtaaaaatgaaagcaagGAATATATTGTCTTAGGAAATGGCTTATCTGATAGCAATCAGTTCCCAGATGACCCGCATGATCAGCTTATCCAAATGGTTGCTGAACTGGGATTTCAGAATGAATTTCTGAAATCACAGTTTGAGGGCTTTAGCAGTCTGTACAGTGTTCAAAGTGAGCCTAGTCCACAAAAAATAGTTGGTGGCCCGGAAGATGGGGATTCTGACATTGTGAAAGAACTGCAAGGGAAGATAGAATCACTAAACAGAGAACTTCTGGAAGAAAAACAGACAAGAGCTGCAGCTGAAGAGGCTCTGAAGCATCTTCAAACAGCATATTCAGAGGCTGATGCAAAAGCCCAAGAACTTTCTGAGAAACTTTTAGAAGctgaaaaaaaattggatgaagaaataaaagagcgTGATGAGAAGTATGCTGAACTCGACTCAAAGTTCAACAGGCTTCACAAAAGAGCAAAACAACGTATTCAAGAGGTTCAAAAGGAAAAAGATGATCTTGAGGCCCGTTTCAATGAGGTGAAGGAAACAGCTGAGCGAGCATCATCTGAGAAGTCAGCTTTGCAGCAAGATCTAGAGCGCACAAGGCAGCAAGCTAATGAGGCATTAAAAGCAATGGATGCGGATAGGCAACAACTTCGAAGTGCAAACAACAAACTTAGAGATACCACTGAGGATTTACGGCGCTCATTGCAACCTAAAGAGAGTGCTATTGAGACATTGCAAGAGTCACTTGCAGAAAAGGAACAGATGTTGGAAGAAATGCGAGGATTACTTCAGGCTGCTGATGAAAAAAGGCAAGCTTCAATGGCTGAGCTCTCAGCTAAACATCAAAAGAATATAGAGAGTTTGGAGGCTCAAATTAACGAGGCATTATCTGATAGAAGTAAGGCAACTGAAACCATTTCTTCATTGCAGGTACTAGTTGCAGAGAGAGAATCTAAAATTGCAGAGATGGAGGCAGCATCAACTGGGGAAGCAGCACGACTTAGAGCAGCAGTGGAAAGTGTGAAGGGAGAGCTTTCTCATCTGAAACAGGAGCATgagaaagaaaaggaaagctgGGAGACTGCATCTCGGGCATTGAAAACAAAACTCGAAATTGCAGAGAGTAATTGCATACGTGCTGAAGTTGAAGTAGCAAAAATGAGAAGTCAACTGGAATCGGAGGTCTCTGCACAAACCAGGATTCTCAATATGAGGGACTCTGAATTGTTGGCCTTCAAGGAAGAGATCAGCCGCCTTGAAAGTGAATTTTCTTCCTACAAGGTTCGTGCACATACACTTCTCCAGAAGAAGGATGCAGAACTTGCTGCAGCTAAAGACTCTGAGCAACTCAAAGTTCTTGAAGAGGCTCTGAAAGAAGCTGAAAGTCAAATATCATCAGTTACAACAGAAAGGGATAGAGTTCTTCAAAATCTCCAATCTGCTATTGCAAATCACGAGAGAGAACTCACAGAAAGAGACACGGCCCTTGAAAAGGCCAAGCAGCAGAGAAAGAGCTTAGAAATGAAGCTTGATTCAGTTAATGCTCAGcaccaaaaagagaaagaagcatgGGAACTAAGCCTCCAAAATGTAGAAGAAACATGGCGAATTAGATGTGAGGCAATGAAGGCAGAAAATGAAGCAACGTCTACacttgatataaaaaaagaactgGAAGACCTTAAACTGCGTTACAAAAAGTTAAAGGAAGAGCATGATTCATTCCGTGATCTTGCTGATAGAATGATTGGGGAGAAAGACAATGAAATATCTAGACTTCTAGATGATAACAAGAAACTTCGTCAGTCTCTGCAATCAACGCCACAACTgGTGGATCAAAATGATAACTATCACACAgCCTTTCATAAACAGGATCCACAGAGTTTTAGTCCCTCAGCTGAAGAACAGCAAATTCTGCTTTTGGCAAGACAACAAGCCCAAAGAGAGGAAGAACTGGCACGATCACAGCGGCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGAGAGAATCGTCTCCATAGCCAACAGGAGGCAATGCTAAAAGCTGAGTTTCGTGACATGGAAAGATCAAAAAAACGGGAAGGTGTGGATATGACgtatttgaaaaatgttattttaaagctTCTTGAGACAGGTGAAGTGGAGGCATTACTACCAGTTATTGGAATGCTGCTTCAGTTCAGTCCAGAAGAGGTGCAGAAATGTCAACAGGCATATCGCAATGCAACAGATGTTCCGCCAAGTCCTGCAAGTGATTCAGGATCTGGCTTATCTCTCTTCTCAAGATTCTCATTTTCGTA 2558 0.405 MWCRRWTIRKRQRFLLSFSVHALSFPTHWQYEVNGYQFSDCACKPMETSSTMATSEGDDGEVTKSHVEDSSKSDEQFSDLHHSKNESKEYIVLGNGLSDSNQFPDDPHDQLIQMVAELGFQNEFLKSQFEGFSSLYSVQSEPSPQKIVGGPEDGDSDIVKELQGKIESLNRELLEEKQTRAAAEEALKHLQTAYSEADAKAQELSEKLLEAEKKLDEEIKERDEKYAELDSKFNRLHKRAKQRIQEVQKEKDDLEARFNEVKETAERASSEKSALQQDLERTRQQANEALKAMDADRQQLRSANNKLRDTTEDLRRSLQPKESAIETLQESLAEKEQMLEEMRGLLQAADEKRQASMAELSAKHQKNIESLEAQINEALSDRSKATETISSLQVLVAERESKIAEMEAASTGEAARLRAAVESVKGELSHLKQEHEKEKESWETASRALKTKLEIAESNCIRAEVEVAKMRSQLESEVSAQTRILNMRDSELLAFKEEISRLESEFSSYKVRAHTLLQKKDAELAAAKDSEQLKVLEEALKEAESQISSVTTERDRVLQNLQSAIANHERELTERDTALEKAKQQRKSLEMKLDSVNAQHQKEKEAWELSLQNVEETWRIRCEAMKAENEATSTLDIKKELEDLKLRYKKLKEEHDSFRDLADRMIGEKDNEISRLLDDNKKLRQSLQSTPQLVDQNDNYHTAFHKQDPQSFSPSAEEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHSQQEAMLKAEFRDMERSKKREGVDMTYLKNVILKLLETGEVEALLPVIGMLLQFSPEEVQKCQQAYRNATDVPPSPASDSGSGLSLFSRFSFS 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00941 852 Coils Coil 735 769 - -
Bva08g00941 852 ProSiteProfiles GRIP domain profile. 777 824 IPR000237 -
Bva08g00941 852 Coils Coil 414 473 - -
Bva08g00941 852 Gene3D - 156 321 - -
Bva08g00941 852 Coils Coil 361 388 - -
Bva08g00941 852 MobiDBLite consensus disorder prediction 59 80 - -
Bva08g00941 852 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 112 823 - -
Bva08g00941 852 Coils Coil 519 617 - -
Bva08g00941 852 MobiDBLite consensus disorder prediction 261 281 - -
Bva08g00941 852 Pfam GRIP domain 781 820 IPR000237 -
Bva08g00941 852 SMART 1grip 780 824 IPR000237 -
Bva08g00941 852 Coils Coil 237 317 - -
Bva08g00941 852 MobiDBLite consensus disorder prediction 261 278 - -
Bva08g00941 852 MobiDBLite consensus disorder prediction 49 80 - -
Bva08g00941 852 Coils Coil 634 661 - -
Bva08g00941 852 Coils Coil 321 359 - -
Bva08g00941 852 Coils Coil 666 686 - -
Bva08g00941 852 Coils Coil 159 232 - -
Bva08g00941 852 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 112 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00941 Bva-Chr8 4769221 4777196 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00941 - - gmx:100775990 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00941 08 4769221 4777196 Bva08g00941 08 4769221 4777196 ECH