Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00882 ATGATCATGGGAAAGAGGAACGCCCACGTTGTTTTATCATCAGAGGATGAAGATAATGCTACTCTTCGTTCATCGAGTTCAAATAGTAGCTATACAAAGTCGAAGTCGAAGTCGACGTCAACGAGCTCCAGAGGGAAGAAGAGGGCACGCCTCTCTAGTTCACGGCCTCGATTGTCTAAAGACTCCAGCAAGTTGCACGAGATCAGCTTACTTAGAGATGACTTCAATGAAGTGTTTGCTGGGTTCAAGTGTTCACCAGGTACTGAAAAGAGCAATGCAGAGGAGCTATGGATTGATAAATACAAGCCCCATTCCCTGGAAGAGCTTGCTGTTCAGAAAAAGAAGGTTGAAGAAGTTAAAATCTGGTTTGAGGAAAGGTTGAAACGTTCGCAGgGTGTGTACAAAAATAATGTTCTTGTCATCAGTGGTCAGGCTGGAGTTGGAAAATCTGCTGCTATTCATGTAATTGCATCTCACCTTGGAGCTGTACTATGTGAATGGAACACACCTACACCTGTAATTTGGCAAGAACATCTTTATAACTCTGGTACAGGTGTCAAATTCACGTCCAAGTTGGAGGAGTTTGAAACTTTCATTGAGAGAATACGGAAATATGGGTTGATGCCAACTTCCATTATTGGGGAGTCAAAAGCATCAATCATACTTTTAATTGATGATCTTCCTTTGACAAATGGAAAAGCTGCTTTTGGAAGACTCAAAGATTGCTTGCATCTTTTTGCGCGCTCAACTCTGATACCTACAGCTATATTGGTGACAGACTATGGCAACGCAGATTCAGCAGATTATACTACACGGTGCTGGGAAGAACTCAAGTTTTCTCTAGAGAGTGCTGGGGCTTGTAAGATTGTATTCAACCCCATAACGACTAATTCGATTAGAAAGGTACTTTTTAGAATATGCCAACTGGAGCAGTGTGATTTAACTGCCGAACACGTTGATCTATTAGCAAAAGCAAGTGGAGGTGACATAAGACATGCAATCACATCTTTACAGTTTTTCTCTCTGAAGCAGAATAAAATGCACTCTCTATCTCTGTCCTCTCTTTCTCCCAGTGTatctaaaaagagaaaaagtgaaCCTGTTATTTTAGACGATGCATATTCCTTGTACTTCAGCAGGGATGAGAcgctttctttatttcatgcTCTGGGGAAATTGCTgcataataaaagagaaactgGAGCTGCAATAGAAAATGACAAAGATGCAGTTCTTATACAAGAAAGATTAACAAGGTTGCCCTTAAAAATGGACGTCCCTGAGAAGATTCTCTGTCAAGCCCACGCTCAACCTTGTCCTATTGCTGATTTTCTACATGAAAACGTGctagattttttaaatgaggAAGCAATAGAAGATGCGTGGACTCTGTCTTCATACCTTGGCGATGCTGACATTCTTCTTGCTAAACTTCGAGGAATGGTATCTAGATATGATGAGGCAGACAGTGTCTTACAGTCAGCTGCTGGTTCTGTTGCTGTTCGTGGGGTATTATTTGGAAATTCTCATCCGTTATCCTCCAGATGGCATGCTATTCGGAGGCCAAAGCTCTGGGAGGTTGAGAGAACTTCAATACAAAATAAGAATGAGATGTTTAGGCAGAGAATCGCGGATTGTAAAGGGTTTAGCTCAAGTAATTTGTCGGTTATTGTCACTGAGTACATGCCAACCTTTAAATTGCTTGGAAATAAGGCAAGTGGATGTTTTAAATCTCCTCAGGTATCAGTGCAGAACTTGGGCATGAAAGATGTTGATTCTTTTGACAAAATGAGTTTAGAGGATCAAGCAAGCGGAACTTCTGATGATGACGACGATATAGAAGATTGGTA 1850 0.3978 MIMGKRNAHVVLSSEDEDNATLRSSSSNSSYTKSKSKSTSTSSRGKKRARLSSSRPRLSKDSSKLHEISLLRDDFNEVFAGFKCSPGTEKSNAEELWIDKYKPHSLEELAVQKKKVEEVKIWFEERLKRSQGVYKNNVLVISGQAGVGKSAAIHVIASHLGAVLCEWNTPTPVIWQEHLYNSGTGVKFTSKLEEFETFIERIRKYGLMPTSIIGESKASIILLIDDLPLTNGKAAFGRLKDCLHLFARSTLIPTAILVTDYGNADSADYTTRCWEELKFSLESAGACKIVFNPITTNSIRKVLFRICQLEQCDLTAEHVDLLAKASGGDIRHAITSLQFFSLKQNKMHSLSLSSLSPSVSKKRKSEPVILDDAYSLYFSRDETLSLFHALGKLLHNKRETGAAIENDKDAVLIQERLTRLPLKMDVPEKILCQAHAQPCPIADFLHENVLDFLNEEAIEDAWTLSSYLGDADILLAKLRGMVSRYDEADSVLQSAAGSVAVRGVLFGNSHPLSSRWHAIRRPKLWEVERTSIQNKNEMFRQRIADCKGFSSSNLSVIVTEYMPTFKLLGNKASGCFKSPQVSVQNLGMKDVDSFDKMSLEDQASGTSDDDDDIEDW 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00882 616 Gene3D - 94 279 IPR027417 -
Bva08g00882 616 CDD HLD_clamp_RFC 294 341 - -
Bva08g00882 616 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 46 616 IPR004582 GO:0006281
Bva08g00882 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 344 IPR027417 -
Bva08g00882 616 Pfam Rad17 P-loop domain 90 261 - -
Bva08g00882 616 Gene3D - 295 364 - -
Bva08g00882 616 MobiDBLite consensus disorder prediction 1 60 - -
Bva08g00882 616 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 46 616 - -
Bva08g00882 616 MobiDBLite consensus disorder prediction 17 39 - -
Bva08g00882 616 MobiDBLite consensus disorder prediction 597 616 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00882 K06662 - gmx:100799826 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00882 08 4517999 4523165 Bva08g00882 08 4517999 4523165 ECH