Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00880 ATGGGTTGCTGCTATTCGAgaatagaaagagaagaaacggTGTCGCGATGCAAGGCGAGGAAGCGTTACATGAAACAGTTTGTGCAAGCAAGGCATGCGTTCTCTGCGGCACATGTTATGTATATTAGGTCTCTTCGTAGCACTGGTTCTGCTTTGCTTCAGTTCGCCAATGCAGAGACCATcgtccaccaccaccacccccCGCATCCACAACCGCAGCCGATCCTCCCATCTCCGCCTCCACGAACCCCCACCCCAATGCCGCCGCCTCCTCCTCCAATGAGTCCAAGCTCTGATACGTGGACATCAGTAACTGCTTCCCCTGCTCTTCCGCCGCCACCGCCGCCACCGGTGTCATCTACCGCCTGGGATTTCTGGGACCCATTCATGCCCCCTCCTCCTTCCTCGAGGTCTGTGACAGAGGAGGAATGGGAAGCGACAACGACCACGGGGTCTGAAGTTGTGGTTACGACCACGGGAGCGGCGAGTATGACGGCGCCGCCTTCTGTGGTTAGTGGATTTTCCAAGGAAACAACGAGTGAGCTTGCAATGGTGGTGTCTAGGAATACAAAAGATCTGGTCGGGGTTATAAAAGAGCTCGACGATTACTTTCTTAAGGCTGCTGATGCTGGCGGCCAAATCTCGGCCCTCTTGGAGGTTCCAACCTCTGGTTTATCTAACGAGAATAAAGGAATGACAGGTAAAGTGTACAACTATGGATGGAGTTTGAGTCCATCGCTGTGGTCTCGGGGTTCAAGTCCTAAACCTCATGGATTTGGCAAGCTGGGTTGGGAAATTCCTGCCATTAATTTTGGTGCCAAAGATACTGTAAGCGGTAGTCACTGTTCCACCGTTGAGAGGCTATATGCATGGGAGAAGAAATTGTACCAAGAGGTTAAGAATGCCGAGTCCATAAAGATAGAGCACGAAAAGAAGGTGGCACTGCTAAGGAAGCTAGAGATGAAGAGGGCTGACTATGTGAGGacagagaagatgaaaaaagaGGTTGAGAAATTAGAATCCCAGATGATGGTTGCTTCCCAAGCCATTGAGAGTACATCCGATGAAGTCatcaaattaagagaaaaagaactCTATCCCCAACTGCTCGAACTAATCAAAGGATTGACGTGCATGTGGAGAAGCATGTACGAGTGTCATCAAGTTCAAAAGCATATTGTTCAGCAGCTGCAATACCTGAATGCCATTCCATCAACTAAACCCACTTCTGAGATTCATAGGCAGGCAACTCTTCAGCTAGAGCTTGAAGTGCAGCAATGGCACCAGTCCTTTTGCAACCTCTTCAAGGCCCATAGGGATTATATACAGTCCCTGACGGGGTGGCTGAGGCTCAGCCTTTTCCAGTTTAGTCGAAACCCATTGGGAACAACTGCTCAAGAGTCCAAGATATACTCCCTCTGTGAAGAGTGGCACCTTGCAGTTGATCGAATTCCAGACAAGGTAGCATCTGAAGGAATCAAAAGCTTCTTGACAGTTATCCATGGCATTGTGGTCCAACAAACAGAGGAGAATAAACAGAAGAAGAGGTCAGATTGTGCATTCAAAGAGCTTGAGAAGAAGGTGGTTCAGCTTCGATCCTTGGAGTGTAAATATGGTCCATATTCCATGCCCGATACGCTGAGAACCAAGGACCCTGTCACAGAGAAGCGGGCAAAGGTGGAGACTTTGAGAGCAAAGGCAGAGGAAGAGAAGACCAAGTATGAAAAATCAGTGAGCGTAACAAGGGCGATGACACTGAATAACATGCAGATGGGCTTCCCACACGTTTTTCAGGGGATAGTGGGATTTTCAAGTGTGTGTACAGAGGTTTTTGAGTCCGTATACAACAAAGCAAAAATTACTGAACAGCAGCATGATGTCAAGAGATTATTACCTTA 1898 0.4652 MGCCYSRIEREETVSRCKARKRYMKQFVQARHAFSAAHVMYIRSLRSTGSALLQFANAETIVHHHHPPHPQPQPILPSPPPRTPTPMPPPPPPMSPSSDTWTSVTASPALPPPPPPPVSSTAWDFWDPFMPPPPSSRSVTEEEWEATTTTGSEVVVTTTGAASMTAPPSVVSGFSKETTSELAMVVSRNTKDLVGVIKELDDYFLKAADAGGQISALLEVPTSGLSNENKGMTGKVYNYGWSLSPSLWSRGSSPKPHGFGKLGWEIPAINFGAKDTVSGSHCSTVERLYAWEKKLYQEVKNAESIKIEHEKKVALLRKLEMKRADYVRTEKMKKEVEKLESQMMVASQAIESTSDEVIKLREKELYPQLLELIKGLTCMWRSMYECHQVQKHIVQQLQYLNAIPSTKPTSEIHRQATLQLELEVQQWHQSFCNLFKAHRDYIQSLTGWLRLSLFQFSRNPLGTTAQESKIYSLCEEWHLAVDRIPDKVASEGIKSFLTVIHGIVVQQTEENKQKKRSDCAFKELEKKVVQLRSLECKYGPYSMPDTLRTKDPVTEKRAKVETLRAKAEEEKTKYEKSVSVTRAMTLNNMQMGFPHVFQGIVGFSSVCTEVFESVYNKAKITEQQHDVKRLLP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00880 632 PANTHER UNCHARACTERIZED 1 617 - -
Bva08g00880 632 MobiDBLite consensus disorder prediction 67 97 - -
Bva08g00880 632 Coils Coil 329 356 - -
Bva08g00880 632 Coils Coil 553 577 - -
Bva08g00880 632 Pfam Protein of unknown function (DUF632) 193 501 IPR006867 -
Bva08g00880 632 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 617 - -
Bva08g00880 632 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Bva08g00880 632 MobiDBLite consensus disorder prediction 63 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00880 Bva-Chr8 4510937 4515030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00880 1 62 Acyl Lipid Metabolism Gene Families AT2G27090 40.323 2.23e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00880 - - aprc:113869576 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00880 08 4510937 4515030 Bva08g00880 08 4510937 4515030 ECH