Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00873 ATGACTTCATTATTGCAGGACAATCCACTTCTATTAGATAACAATGTTGAGGAGCGAGTAAATGACTTCGTTAGTGCCGCTCTTAGCCAAgcAAGTGTGACTCGGGGAAACCATATTATGTGGACCATGGGTGATGATTTCCAGTACCAATATGCAGAGACTTGGTTCAGGCAAATGGATAAATTCATTCCCCATGTTAACAAGGCTACTGGTGCATATATATTTCGTCCTTATGGATCCCCTACTGTTTCAAGACCAGTGCTCCCGAAGGTAATCCGTGCTCCTAATGTTGCTTTGGTCACTCTTGAGATAAAGGAGTTGAAGGAGGTAAGCTTATCAGCTAACCAAGAGAAGTCAGAGATGAAGAAGTA 371 0.4205 MTSLLQDNPLLLDNNVEERVNDFVSAALSQASVTRGNHIMWTMGDDFQYQYAETWFRQMDKFIPHVNKATGAYIFRPYGSPTVSRPVLPKVIRAPNVALVTLEIKELKEVSLSANQEKSEMKK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00873 123 PANTHER ALPHA-MANNOSIDASE 4 69 - -
Bva08g00873 123 Coils Coil 104 123 - -
Bva08g00873 123 Gene3D Glycoside hydrolase 38, N terminal domain 2 72 IPR027291 -
Bva08g00873 123 SUPERFAMILY Glycoside hydrolase/deacetylase 6 83 IPR011330 GO:0005975
Bva08g00873 123 PANTHER ALPHA-MANNOSIDASE 4 69 - -
Bva08g00873 123 Pfam Glycosyl hydrolases family 38 N-terminal domain 13 74 IPR000602 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00873 Bva-Chr8 4481649 4482674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00873 5 68 Glycoside Hydrolase AT3G26720 71.875 8.08e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00873 K01191 - twl:120003907 112.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00873 08 4481649 4482674 Bva08g00873 08 4481649 4482674 ECH