Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00860 ATGGCTGCTGCTGTAACCGCTGCAGTCTCCTTTCCATCCACCAAATCCTCTTCTCTATCGAGCAGGACCTCTATCGTTAACCCAGAGAGAGTAGTGTTCAGAAAGGTTCAGCTGCAGTTCAGAGATTTTTGTAGCACTGGGAGGATAGGTTACGTTAGAGCCCAGGTTACCACTGAGGCTGAGGCACCTGCCAAAGTTAAAAAGGAATCCAAGAAGCAAGAAGAGGGCGTGATTGTGAACAAGTACAAACCCAAGGAGCCATACATTGGCAGATGCCTGCTCAACACTAAGATCACTGGGGATGATGCTCCAGGAGAGACTTGGCACATGGTCTTCAGCACCGAGGGAGAGGTTCCTTACAGAGAAGGACAATCAATTGGAGTAATCCCAGATGGTGTTGACAAGAATGGCAAGCCTCACAAGCTGAGATTATACTCAATTGCCAGCAGTGCCCTTGGTGACTTTGGAGACTCCAAAACTGTTTCTCTGTGTGTGAAACGTCTTGTGTACACAAATGAGAATGGAGAACTTGTCAAGGGAGTCTGCTCAAATTTCTTGTGTGACTTGAAGCCTGGAGCAGAAGCAAAGATCACAGGACCTGTTGGCAAAGAAATGCTTATGCCAAAAGATCCTAATGCCAACATCATCATGCTTGCAACTGGAACTGGGATAGCTCCTTTCCGCTCATTTTTGTGGAAAATGTTCTTTGAGAAGCATGATGATTACAAGTTCAATGGTCTTGCATGGCTTTTCTTGGGTGTCCCCACAAGCAGCTCACTGCTTTACAAGGAGGAATTCGAAAAGATGAAGGAGAAGGCACCTGATAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAGCAAACCAAtgaaaagggggagaagatgTACATCCAAACCAGAATGGCTCAATATGCAGAAGAGCTCTGGGATTTACTCAAGAAAGACAATACGTATGTCTACATGTGTGGATTGAAAGGCATGGAAAAGGGAATTGATGACATAATGGTATCATTGGCTGCTAAAGATGGCATTGATTGGATTGAATACAAGAAACAATTGAAGAAATCAGAGCAATGGAATGTTGAAGTCTACTA 1094 0.4388 MAAAVTAAVSFPSTKSSSLSSRTSIVNPERVVFRKVQLQFRDFCSTGRIGYVRAQVTTEAEAPAKVKKESKKQEEGVIVNKYKPKEPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIPDGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGAEAKITGPVGKEMLMPKDPNANIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWDLLKKDNTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKKQLKKSEQWNVEVY 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00860 364 MobiDBLite consensus disorder prediction 1 20 - -
Bva08g00860 364 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 364 - -
Bva08g00860 364 Gene3D Translation factors 55 201 - -
Bva08g00860 364 PIRSF Frd-NADP+_RD 1 364 IPR015701 GO:0016491
Bva08g00860 364 Pfam Oxidoreductase NAD-binding domain 217 331 IPR001433 GO:0016491
Bva08g00860 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 258 269 IPR001709 GO:0016491
Bva08g00860 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 216 235 IPR001709 GO:0016491
Bva08g00860 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 246 255 IPR001709 GO:0016491
Bva08g00860 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 318 326 IPR001709 GO:0016491
Bva08g00860 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 143 150 IPR001709 GO:0016491
Bva08g00860 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 294 310 IPR001709 GO:0016491
Bva08g00860 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 120 130 IPR001709 GO:0016491
Bva08g00860 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 180 189 IPR001709 GO:0016491
Bva08g00860 364 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 205 364 IPR039261 -
Bva08g00860 364 Gene3D - 202 364 IPR039261 -
Bva08g00860 364 SUPERFAMILY Riboflavin synthase domain-like 64 208 IPR017938 -
Bva08g00860 364 CDD CYPOR_like_FNR 80 364 - -
Bva08g00860 364 PANTHER - 1 364 IPR015701 GO:0016491
Bva08g00860 364 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 85 207 IPR017927 GO:0016491
Bva08g00860 364 PIRSF FNR-PetH 2 364 IPR035442 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00860 Bva-Chr8 4423560 4426182 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00860 K02641 - gmx:100802032 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00860 08 4423560 4426182 Bva11g01517 11 14418156 14420871 BWGD
Bva08g00860 08 4423560 4426182 Bva08g00860 08 4423560 4426182 ECH