Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00854 ATGGCACCGGCCAAAACTCTCACTTCTCTCGCCGAAGAGAAGATCTTCGAGTCTCGCTTCGTTCGCGACGAAGATGAGCGCCCGAAAGTAGCTTACAACCAATTCAGCAATGAAATACCGGTCATCTCGTTGGCCGGAATCGACGAGGTGGATGGCCGCAGAACAGAGATTTGCAAGAAAATCGTTGATGCGTGCGAAGATTGGGGAATCTTCCAAGTCGTCGATCATGGCGTCGACACTAAGCTGATTTCGGAGATGACCGGTCTAGCCAAAGAGTTCTTCGCTTTTCCCCCCGAGGAGAAGCTTCGCTTCGACATGACTGGAGGCAAGAAGGGCGGTTTCATCGTTTCCAGTCATCTCCAagGAGAGGCAGTGCAGGACTGGAGAGAAATTGTGACATACTTCTCGTACCCAATTAGAAACAGAGACTATTCGAGGTGGCCAGACAAGCCAGAAGGGTGGATTGGGGTGACCGAACAATACAGCGACCAGCTCATGGGTTTGGCGTGTAAGCTGTTGGAGGTGTTGTCGGAGGCAATGGGGTTAGAGAAAGAAGCTCTGACGAAGGCTTGTGTGGACATGGACCAGAAGGTTGTGGTTAATTTCTACCCGAAATGCCCACAACCGGACATGACACTGGGACTGAAGCGCCACACCGACCCGGGTACCATTACCCTTCTCCTTCAAGACCAGGTCGGCGGTCTCCAGGCTACTAGGGACAATGGGAAGACGTGGATCACGGTTCAGCCAGTGGATGGAGCTTTCGTCGTTAATCTCGGAGATCATGGACACTTTCTGAGTAATGGGAGGTTCAAGAATGCGGATCACCAAGCAGTGGTGAACTCAAACCAAAGCAGATTGTCGATAGCAACATTCCAGAACCCAGCACCGGAGGCAATTGTGTACCCGCTGAAGctgagagagggagagaagagTGTGCTAGAGGAGCCAATCACATTCGCAGAAATGTACAGGAGGAAGATGAGCAAGGACCTTGAGCTGGCTAGGCTAAAGAAGCTGGCAAAGGAGGAGAAGGAGCAGCAGCAGCTAAAGttggagaaagagaaggagaagacCAAATTAGAGAGCAAGCCAATAGAGGAAATCCTTGCTTA 1115 0.4933 MAPAKTLTSLAEEKIFESRFVRDEDERPKVAYNQFSNEIPVISLAGIDEVDGRRTEICKKIVDACEDWGIFQVVDHGVDTKLISEMTGLAKEFFAFPPEEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIRNRDYSRWPDKPEGWIGVTEQYSDQLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPQPDMTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVDGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNQSRLSIATFQNPAPEAIVYPLKLREGEKSVLEEPITFAEMYRRKMSKDLELARLKKLAKEEKEQQQLKLEKEKEKTKLESKPIEEILA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00854 371 MobiDBLite consensus disorder prediction 349 371 - -
Bva08g00854 371 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 353 - -
Bva08g00854 371 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 149 IPR026992 -
Bva08g00854 371 SUPERFAMILY Clavaminate synthase-like 17 330 - -
Bva08g00854 371 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 4 353 - -
Bva08g00854 371 Coils Coil 327 364 - -
Bva08g00854 371 Pfam 2OG-Fe(II) oxygenase superfamily 196 294 IPR044861 -
Bva08g00854 371 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 295 IPR005123 -
Bva08g00854 371 Gene3D - 4 334 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00854 Bva-Chr8 4394224 4395917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00854 38 292 Glycosyltransferase AT5G59530 32.819 1.30e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00854 K00475 - ming:122084606 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00854 08 4394224 4395917 Bva08g00854 08 4394224 4395917 ECH