Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00846 atggGAGAAGGGAGAGAAGGGGATTGGGAGTGCAGTGGATGTAATAACAGGAACTATGCCTTCAGGTCATTCTGCAATCGTTGTAAGCAACCCCGCCTTCTGGTCGATACCAAAACCCCTGCCGACTCTAAGTGGCTTCCTCGTATTGGTGATTGGATCTGCACCGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAGAAGTGCGGACAGCCAAAGGAGTTAGCAGCAATGCCAGCAATTGCAATGACTGGAGCTTCTTTCCCGACTTATTCACATTATTTTTCCAGGGCTCCAGGAGGACTGGAACAAAAGATGAATTTTGGACTGATGGGAAATGGCACTCCACAGCAGTCACTTCCTTTAAACTCTAACTGGCCTGTCGCAGGGGCTGATAAGTATGGCATTCAGCCAATTCCTACATGGCCAACAGGTGGAAACTTTGGTTCTGGACTTCCTTTTGACAATTCCTCCAATCAGAACTCATCTGTTCCAAAAGGATGGCGAGATGGGGATTGGATGTGTAATTGTGGCTTCCATAATTACTCATCGCGTTCACAGTGTAAAAAATGCAATGCTTTTCCACCTGCACCTCGTACAAAACGATTAGCTTCAGAAGAGTTGGTTTATGACTGGGATAGCAAGAGATTGAATATAGGACATACAAATGAGCAGCAACGGTCACACATAAATTTTGAGCCACTCTTAGGGGCCAATGCAGATCCAAAGCCTGGAAACTTCCCTTCTTATCCCGGCATAAACTCAAGTGCTGCTCCAAGTTTGCCAATGCCCATGCCATTTGCACAAGTTACTACGCCCGCACTCCTTGGAAAAGGAGCAAAGCAATGGCGCAATGGAGATTGGATGTGCACAAATTGCAATAATCACAACTATGCTTCCAGGTTGCAGTGTAACAGGTGTAAAACTCAAAGAATGCCGCCCGTGCAACCCGTcaatgtgatgta 971 0.4552 MGEGREGDWECSGCNNRNYAFRSFCNRCKQPRLLVDTKTPADSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKELAAMPAIAMTGASFPTYSHYFSRAPGGLEQKMNFGLMGNGTPQQSLPLNSNWPVAGADKYGIQPIPTWPTGGNFGSGLPFDNSSNQNSSVPKGWRDGDWMCNCGFHNYSSRSQCKKCNAFPPAPRTKRLASEELVYDWDSKRLNIGHTNEQQRSHINFEPLLGANADPKPGNFPSYPGINSSAAPSLPMPMPFAQVTTPALLGKGAKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRMPPVQPVNVM 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00846 323 SUPERFAMILY Ran binding protein zinc finger-like 167 198 IPR036443 -
Bva08g00846 323 SUPERFAMILY Ran binding protein zinc finger-like 280 314 IPR036443 -
Bva08g00846 323 PANTHER ZINC FINGER PROTEIN 266 323 - -
Bva08g00846 323 PANTHER OS04G0110600 PROTEIN 157 220 - -
Bva08g00846 323 ProSiteProfiles Zinc finger RanBP2 type profile. 5 34 IPR001876 -
Bva08g00846 323 PANTHER ZINC FINGER PROTEIN 157 220 - -
Bva08g00846 323 PANTHER OS04G0110600 PROTEIN 3 135 - -
Bva08g00846 323 SMART zf_4 288 312 IPR001876 -
Bva08g00846 323 SMART zf_4 7 31 IPR001876 -
Bva08g00846 323 SMART zf_4 173 196 IPR001876 -
Bva08g00846 323 SMART zf_4 50 74 IPR001876 -
Bva08g00846 323 ProSiteProfiles Zinc finger RanBP2 type profile. 286 315 IPR001876 -
Bva08g00846 323 ProSiteProfiles Zinc finger RanBP2 type profile. 48 77 IPR001876 -
Bva08g00846 323 ProSitePatterns Zinc finger RanBP2-type signature. 52 71 IPR001876 -
Bva08g00846 323 ProSiteProfiles Zinc finger RanBP2 type profile. 171 199 IPR001876 -
Bva08g00846 323 ProSitePatterns Zinc finger RanBP2-type signature. 290 309 IPR001876 -
Bva08g00846 323 Gene3D - 281 315 - -
Bva08g00846 323 Gene3D - 160 200 - -
Bva08g00846 323 Gene3D - 42 77 - -
Bva08g00846 323 Gene3D - 3 33 - -
Bva08g00846 323 SUPERFAMILY Ran binding protein zinc finger-like 5 33 IPR036443 -
Bva08g00846 323 SUPERFAMILY Ran binding protein zinc finger-like 42 76 IPR036443 -
Bva08g00846 323 PANTHER ZINC FINGER PROTEIN 3 135 - -
Bva08g00846 323 Pfam Zn-finger in Ran binding protein and others 48 76 IPR001876 -
Bva08g00846 323 Pfam Zn-finger in Ran binding protein and others 286 313 IPR001876 -
Bva08g00846 323 Pfam Zn-finger in Ran binding protein and others 5 32 IPR001876 -
Bva08g00846 323 ProSitePatterns Zinc finger RanBP2-type signature. 9 28 IPR001876 -
Bva08g00846 323 PANTHER OS04G0110600 PROTEIN 266 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00846 Bva-Chr8 4339939 4343292 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00846 - - gmx:100784874 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00846 08 4339939 4343292 Bva08g00846 08 4339939 4343292 ECH