Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00845 ATGGGTGAAATGGGAGGCAAGGTTGATAAGCCGAAAAGGAACTTGGGCGCATGTTTTTGGTCGATAACGGTGTTCCTCATTGGAGTTCTTCTAATCACTGCATCTGTACTAGAAATACTGAGGAGGTTTCATCGTCCTCAACAACCTCAGCTCTCGGCTCATCCCACCAACGTTGTACAAAAATATGCCACTGCCCTTCAACTGTCTATGCAATTTTTTGACATTCAAAGATCCGGTAAGCTAGAGAATAATAGGATTCCTTGGAGGGGGAATTCAGGGCTACGAGATGGGAGTGAAGCCAATTTGGATCTATCCAAAGGAATGTACGATGCTGGAGACCTTATGAAATTTGGGTTTCCCATGGCTTTTACTGCTACTATCTTGTCTTGGGCGATTCTTGAATATGGTGATCGCATGGATGCAGTGAAGCAATTAGAACATGGCCATGACTCGCTTAAGTGGATAACTGATTATCTCATCAATGCCCATCCCCTTGCAGAAGTTCTCTACATTCAGGTGGGTGATCCTGAAGTGGACCACAATTGCTGGGAGAGACCCGAAGCCATGACTGAGGAAAGACCACCGATCCAGATTAACTCATCTTACCCAGGATCAGAAGTTGCAGCAGAAACTGCAGCCGCTTTGGCCTCTGCATCTCTGGTTTTCAGGAATATCAATCTCACTTATTCTGAAATTCTGCTAACGCATGCTCGTCAGCTGTTTACTTTTGCTGATACTTATAGAGGTTCCTATAGCGTCAGCATCCCTCAAGTGCAGAAATATTATAACTCTTCAGGATATGGGGATGAACTCTTGTGGGCAAGTACCTGGCTCTATCATGCAACTAAAGACCCACAATACCTCTATTATGTTACTGAGCAGAACAAGGAAGCATTTGGTAACTTAGGAAATCTATGCTGGTTTAGTTGGGATGATAAACACGCTGCAACTCAGATTCTCTTGTCGAGGATTAATTTTCTCAGTGCAAAAGGCATCTCAgttgtggagaattttgaccTCCAGATGTATAGAGAAACTGCTGAAATCCTCATGTGTGCGCTTCTACCAGATTCACCAACAGCCACCACCAACAGAACTGATAATGGGCTGATATGGCTGGTAGAATGGAACTCGTTGCAACATTCTGTGGCTTCTGCATTCCTAGCTGTTCTATACAGCGATTACATGCTCACATCTCAAACTGAACACTTATATTGCAGTGGGAAATTGTATAAGCCAGCAGATCTTCGTAGATTTGCGATATCACAGGCAGATTATGTGCTGGGGAAAAATCCAATGCAGATGAGCTATCTTGTTGGGTATGGAAGCCATTACCCTCAACACGTTCATCACAGAGGATCTTCAATTCCAATGGATGCCAACACTGGCTGCAGAGATGGATTCCACTGGCTTCACACACCTAATCCCAACCCCAATATAGCTTTTGGAGCCTTAGTGGGTGGTCCCTCCTTCAATGACACATTCAATGATACAAGAGATAACCATATGCAAACGGAGCCAACTACTTACAACAATGCCCTCCTTGTTGGCCTTCTCTCTGGCCTGCTCGCTAACTCTTCTGTAGTTACCTCTTTTTA 1598 0.438 MGEMGGKVDKPKRNLGACFWSITVFLIGVLLITASVLEILRRFHRPQQPQLSAHPTNVVQKYATALQLSMQFFDIQRSGKLENNRIPWRGNSGLRDGSEANLDLSKGMYDAGDLMKFGFPMAFTATILSWAILEYGDRMDAVKQLEHGHDSLKWITDYLINAHPLAEVLYIQVGDPEVDHNCWERPEAMTEERPPIQINSSYPGSEVAAETAAALASASLVFRNINLTYSEILLTHARQLFTFADTYRGSYSVSIPQVQKYYNSSGYGDELLWASTWLYHATKDPQYLYYVTEQNKEAFGNLGNLCWFSWDDKHAATQILLSRINFLSAKGISVVENFDLQMYRETAEILMCALLPDSPTATTNRTDNGLIWLVEWNSLQHSVASAFLAVLYSDYMLTSQTEHLYCSGKLYKPADLRRFAISQADYVLGKNPMQMSYLVGYGSHYPQHVHHRGSSIPMDANTGCRDGFHWLHTPNPNPNIAFGALVGGPSFNDTFNDTRDNHMQTEPTTYNNALLVGLLSGLLANSSVVTSF 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00845 532 SUPERFAMILY Six-hairpin glycosidases 61 525 IPR008928 GO:0005975
Bva08g00845 532 PANTHER ENDO-1,4-BETA-GLUCANASE 22 532 - -
Bva08g00845 532 Pfam Glycosyl hydrolase family 9 62 519 IPR001701 GO:0004553|GO:0005975
Bva08g00845 532 Gene3D - 58 531 IPR012341 GO:0005975
Bva08g00845 532 PANTHER ENDOGLUCANASE 2 22 532 - -
Bva08g00845 532 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 426 452 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00845 Bva-Chr8 4336910 4338894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00845 8 532 Glycoside Hydrolase AT1G75680 61.174 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00845 - K01179 gmx:100782202 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00845 08 4336910 4338894 Bva08g00845 08 4336910 4338894 ECH