Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00835 ATGGCGTCCCAGAACGACACCGTCAATTCTGGATCTGGTCCCACCGCCACCAATGGCGATGTGACTCCGACCGAGCAGCGGAAGGTGGCATTGATCACTGGCATCACTGGCCAAGACGGCTCCTACCTCACTGAGTTCCTCCTAGAAAAGGGCTACGAGGTTCATGGGCTGATTCGGCGGTCTTCCAACTTCAATACCCACAGAATTAACCACATCTATATCGATCCCCACAACGCCCACAAGGCCCGAATGAAGCTTCACTATGCCGATCTCTCCGATGCCTCCTCTCTCCGGCGATGGGTTGATACTATCCTTCCCGATGAGGTATACAATCTCGCTGCTCAGTCCCATGTCGCTGTCTCCTTCGAGATCCCCGATTACACTGCCGATGTTGTCTCCACTGGTGCTCTCCGGCTACTAGAGGCTGTTCGCTCCCACATCGCCGCCACTGGCCGGAAGCATATTCGCTATTACCAGGCTGGATCATCTGAAATGTTTGGGGCTACTCCACCTCCGCAATCGGAAACTAGTCCATTTCACCCTCGGTCTCCTTATGCAGCGTCCAAATGCGCTGCGCATTGGTACACCGTGAATTATCGCGAGGCTTACGGGATCTTTGCCTGCAATGGGATACTCTTCAATCACGAGTCTCCGAGACGAGGCGAGAATTTCGTGACCCGGAAGATTACGCGGGCAGTGGGGCGGATCAAGATCGGATTGCAGAGCAAATTGTTCTTGGGGAATTTGCAAGCTTCGAGGGATTGGGGTTTTGCTGGGGATTACGTGGAGGCTATGTGGATGATGCTTCAGCAGGATAAACCCGATGATTACGTTGTGGCTACAGAGGAGTCCCACACAGTCGAAGAATTCTTGGAGGTCGCATTTGGCTACGTGGGTTTGAATTGGAAGGATCATGTGGTGATTGACAAGAGGTATTTTAGGCCTGCGGAGGTTGACAATCTAAAAGGTGATGCAAGCAAGGCCAAGAAAGTTCTTGAATGGAAGCCTAAGGTGGGTTTTGAGCAATTGGTGAAGATGATGGTGGACCATGACATTGAAGAGGCTAAGAGGGAGAAGGTGCTTGTGGATGCTGGCTACATGGATGCTCAGCAGCAACCTTG 1121 0.5227 MASQNDTVNSGSGPTATNGDVTPTEQRKVALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTHRINHIYIDPHNAHKARMKLHYADLSDASSLRRWVDTILPDEVYNLAAQSHVAVSFEIPDYTADVVSTGALRLLEAVRSHIAATGRKHIRYYQAGSSEMFGATPPPQSETSPFHPRSPYAASKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQDKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPAEVDNLKGDASKAKKVLEWKPKVGFEQLVKMMVDHDIEEAKREKVLVDAGYMDAQQQP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00835 373 MobiDBLite consensus disorder prediction 1 24 - -
Bva08g00835 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 353 IPR036291 -
Bva08g00835 373 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 28 354 IPR006368 GO:0008446|GO:0019673
Bva08g00835 373 Hamap GDP-mannose 4,6-dehydratase [gmd]. 28 357 IPR006368 GO:0008446|GO:0019673
Bva08g00835 373 CDD GDP_MD_SDR_e 29 353 - -
Bva08g00835 373 Gene3D - 221 347 - -
Bva08g00835 373 Gene3D - 31 337 - -
Bva08g00835 373 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 18 368 IPR006368 GO:0008446|GO:0019673
Bva08g00835 373 Pfam GDP-mannose 4,6 dehydratase 31 347 IPR016040 -
Bva08g00835 373 PANTHER GDP-MANNOSE 4,6 DEHYDRATASE 1-LIKE 18 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00835 Bva-Chr8 4303512 4304979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00835 31 213 Miscellaneous Gene Families AT4G12250 28.272 1.88e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00835 K01711 - zju:107424396 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00835 08 4303512 4304979 Bva08g00835 08 4303512 4304979 ECH