Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00814 ATGGCATACAAATTGTTACTCATCTTGCTGCTCCTTGCATCATCACACACGGAGGCGTCCAATGATGTAGACAAAGAAGCATTACTTGAATTGAAGAGCAGATTAAGTTCTGATCCTTCAGGACTATTGCATTCTTGGACATCTTCCTCTGATTGCTGCTCTGCTTGGGAAGGCATCACATGCGATTCGACAGGCAGAGTCATTAAGCTCATTCGTTCTGGTGTTGTAGACGATGATGGCCTCCTCCTAGAGACGTACATGTCTGGAACATTATCACCTTATCTTGGAAACTTATCTAATCTTCAAGTTCTGGACCTCAGCAATCTCAAGGAGTTGAAGGGTCCGATACCACAAGAATTGGGCAAATTATCTGCTCTCGCTAGCCTTTTTCTTCAGTCAAACAAGCTTACAGGTTCCATACCGCTCGCATTGAATAACCTTTCCCAGCTGCAGCAGCTATACCTTGGTAACAATCTCCTATCTGGTAATCTTCCTTCCTCTGTTTTTGGGTCCTTAACGTCACTTTCAGAACTCAATCTATCTGGGAATGAATTTTCTGGGGGGATTCCATCCTCAATTGGAAATTTGAGATTGCTCACTAACCTTGATCTCCACGGGAACAATTTTCGTGCAAGTATTCCTGCAAGTATTGGCCAGCTTGAGAATCTCAAGTATTTAGATTTGTCTGAGAACCAGATAAGTGGAAGGCTTCCAACTTCAATTGGTGCTCTTTCCCAATTAGTTTTCTTAACTCTgaatcaaaaccaaattaGGGGAAAGATTCCTTCTTCGATTGGGGCCCTCAGTTCTCTGACATTCTGCAGATTATCTGAAAACAAGTTCACAGGCACTTTACCCCCATCCATTGGGATGCTTACCTATATCCAAAGGCTAATTCTTGAGAATAACGAGCTTGGAGGGAAGTTGCCTGCTACCATTGGCCATTTAACCAATCTAACTGACATGTTTTTCTCAAACAATCGTTTTACAGGAACAATCCCATCTACCTTTGCAAACTTACGGAACCTCCGGACACTTGATTTGTCAAGAAACCAACTTTCCGGCGCACTTCCCCCCGGCTTGCTAAGTTGCAGAGGGAAACTTCCAAGCTggttatcatcatcatctatAGCTCAACTTGATTTGTCAAGCAATGCACTAACAGGAAAATTTCCCCCTTGGATTGGAAACATGACAAACCTTGCATTCCTCAACTTATCATATAACAAATTTCATTCCTCAATTCCGgttgaattcaagaatctctCGCTTCTGATGGACCTCGATCTTCGTTCCAACAACCTCAGTGGCCCTCTTGATGTGATATACGAGAAAGAACACAAATACCCACTTGGTTACTTCAATTCTATTGACCTATCCAACAATATGTTCTCTGGTCCCATCGATGAGAACATTGGAGAGAAAGCATCAATGACTGCTCTGAAATCCCTTGTTTTATCTCACAACTCATTAGGAGGATCAATACCAAAGTCTATTGGGAAATTGACACAAATAGAGATACTGGACCTCAGCGACAGTGACCTGTCTGGGAGCATACCTGCGGAGCTCGGTGATGCCAAGGAATTGAATGTGATTCTGTTTTCTAGAAACAAGTTAACTGGCAATATCCCAGAAAAAGTTGTGAGCTCGAAGAGGCTTCGAGTGTTCGATGTGTCCAACAACAATCTCAGCGGCAGGATTCCTCCTCACAAGACCAACATCCCTAGATCTGCATTTATGGGTAATCCTCGATTGTGTGGGTCACCACTACCTCCTTGTAAtcattttta 1790 0.4184 MAYKLLLILLLLASSHTEASNDVDKEALLELKSRLSSDPSGLLHSWTSSSDCCSAWEGITCDSTGRVIKLIRSGVVDDDGLLLETYMSGTLSPYLGNLSNLQVLDLSNLKELKGPIPQELGKLSALASLFLQSNKLTGSIPLALNNLSQLQQLYLGNNLLSGNLPSSVFGSLTSLSELNLSGNEFSGGIPSSIGNLRLLTNLDLHGNNFRASIPASIGQLENLKYLDLSENQISGRLPTSIGALSQLVFLTLNQNQIRGKIPSSIGALSSLTFCRLSENKFTGTLPPSIGMLTYIQRLILENNELGGKLPATIGHLTNLTDMFFSNNRFTGTIPSTFANLRNLRTLDLSRNQLSGALPPGLLSCRGKLPSWLSSSSIAQLDLSSNALTGKFPPWIGNMTNLAFLNLSYNKFHSSIPVEFKNLSLLMDLDLRSNNLSGPLDVIYEKEHKYPLGYFNSIDLSNNMFSGPIDENIGEKASMTALKSLVLSHNSLGGSIPKSIGKLTQIEILDLSDSDLSGSIPAELGDAKELNVILFSRNKLTGNIPEKVVSSKRLRVFDVSNNNLSGRIPPHKTNIPRSAFMGNPRLCGSPLPPCNHF 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00814 596 Gene3D Ribonuclease Inhibitor 285 363 IPR032675 -
Bva08g00814 596 Gene3D Ribonuclease Inhibitor 190 284 IPR032675 -
Bva08g00814 596 SMART LRR_sd22_2 398 419 - -
Bva08g00814 596 SMART LRR_sd22_2 316 342 - -
Bva08g00814 596 SMART LRR_sd22_2 147 180 - -
Bva08g00814 596 SMART LRR_sd22_2 478 510 - -
Bva08g00814 596 SMART LRR_sd22_2 220 246 - -
Bva08g00814 596 SMART LRR_sd22_2 123 144 - -
Bva08g00814 596 Gene3D Ribonuclease Inhibitor 364 596 IPR032675 -
Bva08g00814 596 SMART LRR_typ_2 123 146 IPR003591 -
Bva08g00814 596 SMART LRR_typ_2 398 421 IPR003591 -
Bva08g00814 596 SMART LRR_typ_2 316 339 IPR003591 -
Bva08g00814 596 SMART LRR_typ_2 147 171 IPR003591 -
Bva08g00814 596 SMART LRR_typ_2 478 502 IPR003591 -
Bva08g00814 596 SMART LRR_typ_2 172 196 IPR003591 -
Bva08g00814 596 SMART LRR_typ_2 244 268 IPR003591 -
Bva08g00814 596 SMART LRR_typ_2 220 243 IPR003591 -
Bva08g00814 596 SMART LRR_typ_2 340 364 IPR003591 -
Bva08g00814 596 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Bva08g00814 596 Pfam Leucine rich repeat 377 435 IPR001611 GO:0005515
Bva08g00814 596 Pfam Leucine rich repeat 295 353 IPR001611 GO:0005515
Bva08g00814 596 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Bva08g00814 596 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 361 - -
Bva08g00814 596 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 365 595 - -
Bva08g00814 596 SUPERFAMILY L domain-like 35 364 - -
Bva08g00814 596 SUPERFAMILY L domain-like 288 575 - -
Bva08g00814 596 PRINTS Leucine-rich repeat signature 223 236 - -
Bva08g00814 596 PRINTS Leucine-rich repeat signature 340 353 - -
Bva08g00814 596 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Bva08g00814 596 Pfam Leucine Rich Repeat 481 502 IPR001611 GO:0005515
Bva08g00814 596 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 365 595 - -
Bva08g00814 596 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 5 361 - -
Bva08g00814 596 Gene3D Ribonuclease Inhibitor 21 189 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00814 Bva-Chr8 4176413 4178910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00814 87 593 Receptor kinase-like Gene Family AT5G46330 33.167 1.13e-68 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00814 - - pop:7495522 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00814 08 4176413 4178910 Bva08g00814 08 4176413 4178910 ECH