Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00791 ATGAGGCATTTTCGATTTATACGGCTATCACATCTCTGCAAAACCTTTGGCCAAAACCCTCCCTGCAATTCTCCATCAATTTCAACTTCCTGTATCATACCCAATTATCAATCAATGCTTCAACGTTATTTAGGTTTATCGTGTAATTACTCTACTTCTCAGGATTCAAAGCCAGTCCAATCCGAGAAGGTCACGGTCATCGTGGATGAGCTCATGGGTCTCACGCTGCTTGAAGTCACGGACCTTGTTGAAGTTATGCGCCAGAAAAAGGGCATAAATGAGATGCCaattatgatgatgatgatgccCGGAATGGGAATCGGTGGCTTGAAGGGTGCGCCAAAGGGTGCACccaaaggagaagagaagaaggcTGAGAAGACCGCTTTTGATTTGAAGCTTGAAGAGTTTGATTCTGCAGCGAAGATCAAGGTAATAAAGGAAGTGAGGACATTTACCAATTTGGGGTTGAAGGAGGCCAAGGATTTGGTGGAGAAGGTGCCCACCCTTTTGAAGAAAAGTGTAACCAAAGAGGAAGCAGAGACGATTATTACCAAGATGAAGGAGGTTGGCGCAAAAGTTTCAATGGAATA 593 0.4115 MRHFRFIRLSHLCKTFGQNPPCNSPSISTSCIIPNYQSMLQRYLGLSCNYSTSQDSKPVQSEKVTVIVDELMGLTLLEVTDLVEVMRQKKGINEMPIMMMMMPGMGIGGLKGAPKGAPKGEEKKAEKTAFDLKLEEFDSAAKIKVIKEVRTFTNLGLKEAKDLVEKVPTLLKKSVTKEEAETIITKMKEVGAKVSME 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00791 197 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 64 131 IPR036235 GO:0003735|GO:0005840|GO:0006412
Bva08g00791 197 Hamap 50S ribosomal protein L7/L12 [rplL]. 61 197 IPR000206 GO:0003735|GO:0005840|GO:0006412
Bva08g00791 197 Pfam Ribosomal protein L7/L12 dimerisation domain 64 105 IPR008932 GO:0003735|GO:0005840|GO:0006412
Bva08g00791 197 PANTHER 39S RIBOSOMAL PROTEIN L12 52 197 IPR000206 GO:0003735|GO:0005840|GO:0006412
Bva08g00791 197 CDD Ribosomal_L7_L12 62 196 IPR000206 GO:0003735|GO:0005840|GO:0006412
Bva08g00791 197 Pfam Ribosomal protein L7/L12 C-terminal domain 130 196 IPR013823 GO:0003735|GO:0006412
Bva08g00791 197 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Bva08g00791 197 Gene3D - 127 196 IPR014719 -
Bva08g00791 197 Gene3D Single helix bin 63 126 IPR036235 GO:0003735|GO:0005840|GO:0006412
Bva08g00791 197 SUPERFAMILY ClpS-like 126 196 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00791 Bva-Chr8 4064279 4066894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00791 K02935 - qsu:112000859 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00791 08 4064279 4066894 Bva08g00791 08 4064279 4066894 ECH