Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00787 ATGGCGAGTGAAGAGCCTAGAAGAAAATGGCGGTATACTTGGGAAGCACAGTCCCATGTCCCAACTCTTCGGTTGTTGCTTTTCCACAGAGACACTAAGCCCTCTCTCCAATGCCAGAATCTGAATGTTCACCTTGATCTCTCACAGTCTCTGGTGATAGTTAGCTGGTTTCAGGATGCCCAAGTCTCACTTAGGGTTCCGATTCCTCGGGTTTTGGTCGATGCTGAATCGTCGGTGAGCTTTAGAGCACTGGATGATCATATTGAGGCGAAGGTCGTCCTTCTTCTGCCAGTTGACCACCCAATCGTTTTGAGCTTTGATTCTGTGCTGAATCTATCGGAAGACCAAGAAAAAGTATTGTCAGATGTATCGAAGCCAGTCATTATGAATTCTGaTGTAAAAAGTCTATCTTCTAAAGGAGAAGCTGACTTTTACTGCAGAAGTTGCTCTTTCAAATTGACCAGAAGTCCTCTCAGgaattttattgaaatgccATCAGTCAATTGGCGAGAGGTGGCTGACAACTGGTTTGGGGCTTGCTGTTGTTCATTTGGAGGAATAAGTGAGAAATTGGTTACAAAGTATGCAAATTCTTATGCATGTGTACAGGGAATGTGCTTACTAAGCCCTACAtctatcaatctttgcaaggaTGATCTTGTGGAATGTAATTTTCCTGAATGGGGTAAAAACCAAGAGTGTAATTCTAAAGCAGATACTTCTTATAGTAATGGTGTTAAGAAACCTTCTTCCTTGGCTTCTGGATTACATGAGGAAAGAACTTCTACCTGTGGTGATCAGGGTGAAATGACCTGTACTTTTAATGAGAGTTTAAGGTTTTCACATTCTGAGGATGAAACCTCTTCTGTGAACTTATATGAAGTCActaagagaaaatttaatcatgATAGTTTCTCTTTAGCCTCAGATTCTAATATCCCTGAAGATGTGGCCATAGCTCCTAGTTGTTGTGCACATGCGACAGGCAGTGCTTGCATCCTTGATAATGAAGACGGAGAACGTCATTTATCTGAAACCGCTAGAAGGGGACAAAGAGCAACAACCAATATCGAAATTCTGGCAAATCAGAAGTCTTTTCTCAATGGGTTTCTTGGAGATATTTTCATGGCTAGATTATCCAATCTCTCAAAGGATATTGATTGGCATGAGTTTACATGTCCTCATTGCGCATCTCTTCTTGGAGCCTATCCATGTTATAAGGGCTATATACCTGTAGACAGGGGAGTACGAATGTTCAAATGTTATGTTTCAACTTGTTTGCCCGTGGGAGGATCTGGGGATTTGTTCAGGATGTATACAGTGGAAAAAATGTTTACAGATCAGCTGGTGGAATGTGCAAATGATGAATCATTATTCCGGTTTATGGTTAGAGATCTGAAAACCAAATCCCCTAGTTTGCAAGTCATTCTTATAAATCCAGATACTTGGTCCTGTTCCGGTAATTGTCTTACCGCAGAGGACACTGAAGAACCAGTTCCTAAAGTACAACTACAGCCCATTGTCAAGGTGCTTTACTCTGACTGTAGCGCTGCCACTGAATCTCAATTGAGGGCAATTGAGGAATGGGTAAGCAGGAATTCAgctgaaaacatttttatgcTGACTTATCAAATAGAAGAATTGGTCGGGTCTTTGATGTCATCAAAAGATATATATCCGCCTTCATATGCATCTCTTCAAGGTTTAACTTTGTCATCTATGCAACGGTA 1730 0.3977 MASEEPRRKWRYTWEAQSHVPTLRLLLFHRDTKPSLQCQNLNVHLDLSQSLVIVSWFQDAQVSLRVPIPRVLVDAESSVSFRALDDHIEAKVVLLLPVDHPIVLSFDSVLNLSEDQEKVLSDVSKPVIMNSDVKSLSSKGEADFYCRSCSFKLTRSPLRNFIEMPSVNWREVADNWFGACCCSFGGISEKLVTKYANSYACVQGMCLLSPTSINLCKDDLVECNFPEWGKNQECNSKADTSYSNGVKKPSSLASGLHEERTSTCGDQGEMTCTFNESLRFSHSEDETSSVNLYEVTKRKFNHDSFSLASDSNIPEDVAIAPSCCAHATGSACILDNEDGERHLSETARRGQRATTNIEILANQKSFLNGFLGDIFMARLSNLSKDIDWHEFTCPHCASLLGAYPCYKGYIPVDRGVRMFKCYVSTCLPVGGSGDLFRMYTVEKMFTDQLVECANDESLFRFMVRDLKTKSPSLQVILINPDTWSCSGNCLTAEDTEEPVPKVQLQPIVKVLYSDCSAATESQLRAIEEWVSRNSAENIFMLTYQIEELVGSLMSSKDIYPPSYASLQGLTLSSMQR 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00787 576 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 78 567 IPR019193 -
Bva08g00787 576 MobiDBLite consensus disorder prediction 245 264 - -
Bva08g00787 576 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 11 575 IPR019193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00787 - - gmx:100791241 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00787 08 4045301 4049704 Bva08g00787 08 4045301 4049704 ECH