Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00785 ATGTCGGGACCTCTGTCTCCCAGGGCAGGTCTTGAAAGATCTGAGGTGGCTGGCTCTTTGAAGAAGAAATCGTTCAATGCCTCAAGCAAGTTCAGGAATTCTCTAGCAAGAAAAGGTAGAAGAAGTAGCAAGGTCATGTCCCTTGAAATTGAAGACTTCCATGATGCTGAGGAATCGGTTTCTGTTGATGCTTTTCGTCAAGCTCTTGTACTGGAGGAACTATTGCCTGCAAAGCATGATGATTATCATATGATGCTCAGaTTCCTGAAGGCCAGGAAATTTGATATTgagaaaacaaagcaaatgTGGTCTGACATGCTCAAATGGAGAAAGGAATTTGGCGCTGACACAATTATGGAGGATTTTGAATTTAAGGAACTTAGTGAAGTCTTGCAATATTACCCCCAAGGGCATCATGGAGTAGATAAAGATGGACGACCTGTGTACATTGAGAGATTAGGCCAAGTAGACGCCACCAAGATGATGCAAGTAACAACTCTGGATCGCTATATTAGATACCATGTTATGGAGTTTGAGAAGACATTCAATATCAAGTTCCCAGCTTGTTCAATTGCTGTGAAGAAGCACATTGATCAAAGCACAACCATTTTGGATGTGCAAGGAGTGGGGCTCAAGAACTTCAATAAAAATGCCAGGGAACTCATTACTCGTCTTCAGAAGATTGATGGTGACAATTACCCAGAAACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGGATGTTGTGGAATACTGTGAAGtccttccttgatcccaagaCCACAGCAAAAATCCATGTTCTTGGTAATAAGTACGAGAGCAAATTGCTTGAAATAATTGATGCAAGTGAATTGCCAGAGTTTTTAGGAGGGACTTGCACCTGTGCTGGTCAAGGAGGCTGTATGCGTTCTGATAAGGGCCCATGGAAGGATGCAGAAATAATGAGGAAGGTTCAGAATGGTGATCATAAATGTTCAGTAAAAAGGGAGTCTCAGGCCATGGAAGAAAAGACAGTTATTTCTAGCAATCAGGAAGAAAAGACAGTTATTTCTAGCAATCAGGATGAGGCACGTGAGACTTCAAATTTGGACGCCATTCAATTGACTTCAAATTTGGACGCCAATCAATTATCTACTGTTTGTGACGAGGTCCCTGCTAGTAAGGCTTGCAACTACGACATTGTCCCAGTTACTCATAAAACAGTAGACACATGGGAAACAGTTAAGTACAAATTGTCCTCAAACAATGACGTATGTGTGCCATCAAAAGATGATTACGCCATGATGCTTGATTCATTGAAGATTCATGAAAAAGTGAATTACCAGATTTTCACTGGCCTTATGGCCTTTCTTATGGGCATCATCACCATGGTCAGAATGACACGAAACATGCCCAAGAAACTCACCGATGCCAACTTCTACTCCAATTCCGTTGTTGTTTATTCTGATGACAAAATGATTAAAGGGCAGCTTCCTTCTGACCCATTCCCTGCCCCCGATGGCATCTCTCCCGAAGAGTACATAGCTGTGATGCAACGCATGGCTGAGTTGGAAGAGAGAATgatcaataatattaatagacCTGTCACCATGCCACCTGAGAAAGAGGAAATGCTGCATGCTGCTATAAGCCGAGCTGACGCATTGGAACAGGAACTCATGGCGACCAAGAAGGCTTTGGAGGATTCACTTGCCAAACAAGAGGAGCTTTCAGCTtatattgagaaaaagaagaagaagaagaagatgTTACTCTGGTA 1769 0.407 MSGPLSPRAGLERSEVAGSLKKKSFNASSKFRNSLARKGRRSSKVMSLEIEDFHDAEESVSVDAFRQALVLEELLPAKHDDYHMMLRFLKARKFDIEKTKQMWSDMLKWRKEFGADTIMEDFEFKELSEVLQYYPQGHHGVDKDGRPVYIERLGQVDATKMMQVTTLDRYIRYHVMEFEKTFNIKFPACSIAVKKHIDQSTTILDVQGVGLKNFNKNARELITRLQKIDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTAKIHVLGNKYESKLLEIIDASELPEFLGGTCTCAGQGGCMRSDKGPWKDAEIMRKVQNGDHKCSVKRESQAMEEKTVISSNQEEKTVISSNQDEARETSNLDAIQLTSNLDANQLSTVCDEVPASKACNYDIVPVTHKTVDTWETVKYKLSSNNDVCVPSKDDYAMMLDSLKIHEKVNYQIFTGLMAFLMGIITMVRMTRNMPKKLTDANFYSNSVVVYSDDKMIKGQLPSDPFPAPDGISPEEYIAVMQRMAELEERMINNINRPVTMPPEKEEMLHAAISRADALEQELMATKKALEDSLAKQEELSAYIEKKKKKKKMLLW 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00785 589 CDD SEC14 127 295 IPR001251 -
Bva08g00785 589 Coils Coil 542 573 - -
Bva08g00785 589 MobiDBLite consensus disorder prediction 330 359 - -
Bva08g00785 589 SMART CRAL_TRIO_N_2 81 106 IPR011074 -
Bva08g00785 589 Gene3D - 114 326 IPR036865 -
Bva08g00785 589 SUPERFAMILY CRAL/TRIO domain 126 320 IPR036865 -
Bva08g00785 589 SMART sec14_4 126 297 IPR001251 -
Bva08g00785 589 Pfam CRAL/TRIO domain 132 294 IPR001251 -
Bva08g00785 589 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 2 586 - -
Bva08g00785 589 SUPERFAMILY CRAL/TRIO N-terminal domain 55 122 IPR036273 -
Bva08g00785 589 PANTHER CELLULAR RETINALDEHYDE BINDING/ALPHA-TOCOPHEROL TRANSPORT, CRAL/TRIO-RELATED 2 586 - -
Bva08g00785 589 Gene3D - 47 113 - -
Bva08g00785 589 PRINTS Cellular retinaldehyde-binding protein signature 253 272 - -
Bva08g00785 589 PRINTS Cellular retinaldehyde-binding protein signature 286 295 - -
Bva08g00785 589 PRINTS Cellular retinaldehyde-binding protein signature 84 106 - -
Bva08g00785 589 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 126 300 IPR001251 -
Bva08g00785 589 MobiDBLite consensus disorder prediction 339 359 - -
Bva08g00785 589 Pfam CRAL/TRIO, N-terminal domain 78 105 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00785 Bva-Chr8 4034856 4040325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00785 61 291 Acyl Lipid Metabolism Gene Families AT5G47730 27.500 1.73e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00785 - - lang:109350159 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00785 08 4034856 4040325 Bva08g00785 08 4034856 4040325 ECH