Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00783 ATGTTCTCCCTCAAAGAATCCCCGACAGCAGTATCCACATTGTTCTCTGCCTATGCCTCTTTCGCAGCTTCGATGATGCTAATTCGTTCGATGATCAATGAATTCATCCCCTTCCAAATTCAATCCTACATTTACTCTGCAATTCACTACCTCTTCACCCCTCTCTCCACTTCTCTCACTATAATCATTGATGAGGATTGTGGCATGACCCGTAACCAGGTCTATGAAGCCGCCGAGCTCTATCTCCGCACCAAGATCAGTCCCTCTACCGACCGCATCCGTGTCTCTAAAACCCCGCGCCAGAAGAATCTCTCTTTCACCATCGAAAAGGGCGAAGAAGTAACCGATCAATTCGACGATATTAAGCTCAAATGGCGCTTCGTCTGTGTCGAACCCCAAAATCAAAACTCGCATAACACAGAAAAACGCTGTTTTGAGCTCACCTTCcacaagaaattcaaagaaagAGTAATGGGTTCTTATTTGCTTCATGTTTTGGAAAGAGCTCACCAAATCAAAAACGAAGAGAAGGTCTTGAAGCTCTATAACCGGGACTGTCCGTACGATTCTGAGGATGGGGGAGGGGGTTCCTGGGGTTCCGTAAATCTAGAACACCCAGCCACATTTGAGACGCTGGCCATGGATCCAGAGCTGAAGAAGGCGATTATTGAAGATTTGGATCGGTTTGTGATGAGAAAAGACTTCTACAGAAGAGTTGGCAAGGCATGGAAAAGAGGGTATTTGTTGTACGGTCCACCGGGTACGGGTAAATCGAGCTTAATCGCCGCCATGGCTAATTACCTCAAGTTCGATATCTATGATCTGGAGCTTACCAGTATATATTCCAACTCCGATCTGAGAAGGGTTTTGTTGTCCACAACCAACAGATCCATTCTGGTGATTGAAGATATAGACTGTAGTGTGGACATCAAGGATCGGCTCAGTAACGATCAGTATCAGTATGACCAACCTCATAATGCTAAGTTGACGTTATCTGGTTTGTTGAATTTCATTGATGGATTGTGGTCAAGCTGTGGGGACGAGAGAATCATTGTGTTCACTACCAACCACAAGGACAGGCTTGACCCGGCATTGCTACGTCCAGGGAGAATGGATGTGCACATCAACATGTCTTATTGTTCAGGTGAAGGGTTCAAAGTTTTGGCCTCTAATTACCTTGGCCTTCATGACACTTGTCAAATTCCTCTGTACCAAGAAATTGAAGGCCTGATAGAGACTACAGAGGTTACCCCAGCACAGGTTGCAGAGGAACTAATGAAGAGTGATGATGCTAATGTTGCCCTTGAGGCACTTGCTGGCTTCCTCAAACGCAAGAAGGCTGAAGGAAACCCAGTCAAGGATGAAGAAGGAGTTGACAACATTGAAGGGGATCAAGGCCAAGAAGCCAAGAAGCTAAAAACTAACAATAATATCGGTAGAATTGCTAGAAAAATTAGAAGGGCTGTCAAAGGaagatataaaagata 1487 0.4432 MFSLKESPTAVSTLFSAYASFAASMMLIRSMINEFIPFQIQSYIYSAIHYLFTPLSTSLTIIIDEDCGMTRNQVYEAAELYLRTKISPSTDRIRVSKTPRQKNLSFTIEKGEEVTDQFDDIKLKWRFVCVEPQNQNSHNTEKRCFELTFHKKFKERVMGSYLLHVLERAHQIKNEEKVLKLYNRDCPYDSEDGGGGSWGSVNLEHPATFETLAMDPELKKAIIEDLDRFVMRKDFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLELTSIYSNSDLRRVLLSTTNRSILVIEDIDCSVDIKDRLSNDQYQYDQPHNAKLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRLDPALLRPGRMDVHINMSYCSGEGFKVLASNYLGLHDTCQIPLYQEIEGLIETTEVTPAQVAEELMKSDDANVALEALAGFLKRKKAEGNPVKDEEGVDNIEGDQGQEAKKLKTNNNIGRIARKIRRAVKGRYKR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00783 495 MobiDBLite consensus disorder prediction 448 469 - -
Bva08g00783 495 Gene3D - 376 448 - -
Bva08g00783 495 SMART AAA_5 243 381 IPR003593 -
Bva08g00783 495 PANTHER - 10 474 - -
Bva08g00783 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 431 IPR027417 -
Bva08g00783 495 Pfam ATPase family associated with various cellular activities (AAA) 248 378 IPR003959 GO:0005524|GO:0016887
Bva08g00783 495 Gene3D - 200 375 IPR027417 -
Bva08g00783 495 Pfam Domain associated at C-terminal with AAA 36 129 IPR025753 -
Bva08g00783 495 CDD AAA 244 379 - -
Bva08g00783 495 ProSitePatterns AAA-protein family signature. 349 367 IPR003960 GO:0005524|GO:0016887
Bva08g00783 495 PANTHER BCS1 AAA-TYPE ATPASE 10 474 - -
Bva08g00783 495 MobiDBLite consensus disorder prediction 448 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00783 Bva-Chr8 4028919 4030737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00783 208 372 Miscellaneous Gene Families AT5G58870 33.898 3.94e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00783 - - qsu:112029442 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00783 08 4028919 4030737 Bva08g00783 08 4028919 4030737 ECH