Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00782 ATGAGATCCTCCTATGAGggtcttttctcttctttcacgACCTTTCGTTCTGCATCTTCATGGTTCGAGCTCTATGCCGCTTTCTCCACGTTCATGATGCTCTTTCGGACTGCAATCAACGATCTCATACCCCGCCAAGCTCAATCTTTCATCGTCTCAAAGcttaaagatttattttctgatCGCCAATCAGGTAACCTCGTCACCCTTCAAATCCATCAATATTGGGATGGGCAGCGAAATTTACTCTTCCACGCTGCCAAAGAGTACCTTCCGGAGAGGATCACCCACACTTACAAAGCACTCAAGGTGGGCAAATTGGAGAAGCACAAGAAGGTGGTCCTCGCAATTGACGAAAAGCAAGAGGTGGTCGATGAATTTGAAGGCATCAAGCTTAATTGGAAGCTAACTGAAAGTGTCAAAGAACAGGATCGTAAGTACGACAAGGTAACCGACAATTCATTTGTACTAAGCTTTGATGAGAAACACAGAGAGATAGTGATGAGTAAGTATATACCACACGTTTTGCGCACTCACGAAGCCATGAAAGCAGAGCAGAGGATTGTGAAGATCTATTCCTTGAGCTCTCGCCAATGGAAGAAAAGTGACTTAACGCACCCTGCAACATTTGACACATTAGCCTTGGATCCTGAGCTGAAGCAATCGATTATCGGCGATTTAAACCGATTCCTGAAGAGAAAGGAGCTGTACAAGAAAGTGGGAAAACCATGGAAACGTGGGTATCTGTTATATGGTCCTCCTGGAACTGGAAAATCCAGTCTCATTGCAGCCATGGCCAATTACTTGAAGTTCGATATCTATGATTTAGAGCTCACCCGTGTTTATTCCAACTCAGATCTGATGAGAGCAATGAGCGACACATCGAACCGTTCCATCATTGTTATTGAAGATATAGACTGTAACAAAGAGGTGCATGCTCGATCAAAACCCAGTAAAGGTCCGGACTTTGACTCGGACTCGGAATTTGACACAATTCCTAAAATTGCCAAGGTCAGCGAGGGGTTTACTCTGTCGGGTCTGCTGAATTACATGGACGGGTTGTGGTCAAGCTGCGGAGAGGAGCGAATTATAGTCTTCACTACTAACCATGTAGAAAAAATAGATCCAGCGTTGTTGAGAGCAGGGCGAATGGACATGCACATTAACTTGTCCTTCTGCAAGGCTAAGGCATTCAGAATCTTAGCCTCCAATTACTTGGACCTTCAGGGGCCTCACCCACTTTTGGAACAAATAGAAGAGGTGCTGGAGAAAATAGAGGTGACCCCTGCAATTGTGGCAGAGCAATTATTGAGAAATGAAGACCCTGATGTTGCTCTGGAACAAGTTCTTAACTTCCTCAAGGAAAAGCAGACGGAGAGCAATGAGCAAAAGTA 1394 0.4369 MRSSYEGLFSSFTTFRSASSWFELYAAFSTFMMLFRTAINDLIPRQAQSFIVSKLKDLFSDRQSGNLVTLQIHQYWDGQRNLLFHAAKEYLPERITHTYKALKVGKLEKHKKVVLAIDEKQEVVDEFEGIKLNWKLTESVKEQDRKYDKVTDNSFVLSFDEKHREIVMSKYIPHVLRTHEAMKAEQRIVKIYSLSSRQWKKSDLTHPATFDTLALDPELKQSIIGDLNRFLKRKELYKKVGKPWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLELTRVYSNSDLMRAMSDTSNRSIIVIEDIDCNKEVHARSKPSKGPDFDSDSEFDTIPKIAKVSEGFTLSGLLNYMDGLWSSCGEERIIVFTTNHVEKIDPALLRAGRMDMHINLSFCKAKAFRILASNYLDLQGPHPLLEQIEEVLEKIEVTPAIVAEQLLRNEDPDVALEQVLNFLKEKQTESNEQK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00782 464 SMART AAA_5 244 394 IPR003593 -
Bva08g00782 464 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 14 459 - -
Bva08g00782 464 Pfam Domain associated at C-terminal with AAA 43 137 IPR025753 -
Bva08g00782 464 PANTHER BCS1 AAA-TYPE ATPASE 14 459 - -
Bva08g00782 464 CDD AAA 233 391 - -
Bva08g00782 464 Pfam ATPase family associated with various cellular activities (AAA) 249 390 IPR003959 GO:0005524|GO:0016887
Bva08g00782 464 Gene3D - 389 461 - -
Bva08g00782 464 ProSitePatterns AAA-protein family signature. 362 380 IPR003960 GO:0005524|GO:0016887
Bva08g00782 464 Gene3D - 199 388 IPR027417 -
Bva08g00782 464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00782 Bva-Chr8 4026738 4028406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00782 210 390 Miscellaneous Gene Families AT2G29080 29.101 5.03e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00782 - K08900 gmx:100787726 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00782 08 4026738 4028406 Bva08g00782 08 4026738 4028406 ECH