Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00768 ATGGAGCTGGCCTTGCACATATCTGCAACGGCAACTCTTCCCAGAGAGAAGTTTTTCACTCTCACAGTTTTTAATCACTCTCTGTTTCCTGGGTTCACTCCCAGAACTTCATTCCAACCTATCCCACTTGAATTGTCGTCTCAGCTTAGTTGTAGAAATAGGAATCGTCGCCTTGAAGCATTTACCGACGAAACACCGCAAGTTTGGGTAAGCGAACGAGAATTTAACAACCAAAtagaagaaatggaagaagCTCAGACGAGCTCTGATTTTGAGTATGACTTATCAGTTTTGTCCCTCAGCGAGAAACCAGAAAGAAATATGGGCTTGCTGGACGAAGATGAAGCCGAGGAGCTCGATTATGAGTCTCACTCTGACCATCGAAGTGGATACGTGGCTTTACTTGGCAAGCCAAATGTTGGGAAAAGTACGCTAGTAAACCAAATGATTGGGCAAAAGTTGTCAATAGTTACCGATAAACCTCAAACTACGAGGCACCGAATTCTTGGTATATGTTCTGGCTCAGATTATCAGATGATACTATATGACACACCCGGTGTCCTAGAGAAGGAAATGCACAAGTTGGATTCAATGATGATGAACAATGTGCGCCGTGCTGCAGTTAATGCTGACTGTGTTTTGATCCTCGTTGATGCATGTAAAGTGCCTCAAAAAATTGATGAAGTATTGGAAGAAGGTATAAGAGACCTCAAAGATAAACTTCCCACTTTACTGGTTCTGAATAAGAAGGATCTTATTAAACCTGGTGAAGTTTCTAAGAAACTCAAGTGGTATCAAAAATTTACTGATGTTGATGAGGTTATACCCGTCAGTGCGAAATATGGTCATGGGGTTGAAGATGTCAAGGACTGGATTCTGTCGAAGCTTCCCAATGGGCCAGCTCTTTATCCAAAGGGTATCGTCAGTGAGCACCCTGAAAGATTTTTTGTGGGTGAAATTGTTAGAGAAAAGATCTTTATGCAGTATCGAAATGAAATTCCCTACGCATGTCAGgtCAACGTTGTAAGTTACAAGGCTCGTCCCAATGCAAAAGATTTCATACAAGTGGAAATCGTTGTTGAGAAAAACTCACAGAAGATTATCGTAATTGGAAAAGAAGGAAAGGCTCTGAAATTACTTGCAACAGCTGCCCGGCTTGacgttgaaaattttctacaGAAGAAAGTTTATCTTGAGATTGAAGTGAAGgtgaaagaaaattggagGCAAGACGAAGGGCTTCTTAATCACTATGGTTACGGGGGGCAGATCCGAGCTTTATG 1283 0.403 MELALHISATATLPREKFFTLTVFNHSLFPGFTPRTSFQPIPLELSSQLSCRNRNRRLEAFTDETPQVWVSEREFNNQIEEMEEAQTSSDFEYDLSVLSLSEKPERNMGLLDEDEAEELDYESHSDHRSGYVALLGKPNVGKSTLVNQMIGQKLSIVTDKPQTTRHRILGICSGSDYQMILYDTPGVLEKEMHKLDSMMMNNVRRAAVNADCVLILVDACKVPQKIDEVLEEGIRDLKDKLPTLLVLNKKDLIKPGEVSKKLKWYQKFTDVDEVIPVSAKYGHGVEDVKDWILSKLPNGPALYPKGIVSEHPERFFVGEIVREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVEIVVEKNSQKIIVIGKEGKALKLLATAARLDVENFLQKKVYLEIEVKVKENWRQDEGLLNHYGYGGQIRAL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00768 427 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 128 298 IPR030388 GO:0005525
Bva08g00768 427 PANTHER GTPASE ERA 93 421 IPR005662 GO:0003723|GO:0005525
Bva08g00768 427 Hamap GTPase Era [era]. 127 420 IPR005662 GO:0003723|GO:0005525
Bva08g00768 427 PANTHER GTPASE ERA-LIKE, CHLOROPLASTIC 93 421 - -
Bva08g00768 427 Pfam 50S ribosome-binding GTPase 132 249 IPR006073 GO:0005525
Bva08g00768 427 TIGRFAM small_GTP: small GTP-binding protein domain 132 291 IPR005225 GO:0005525
Bva08g00768 427 CDD Era 127 296 IPR030388 GO:0005525
Bva08g00768 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 330 IPR027417 -
Bva08g00768 427 ProSiteProfiles Type-2 KH domain profile. 329 406 IPR004044 GO:0003723
Bva08g00768 427 Gene3D - 309 424 IPR015946 -
Bva08g00768 427 TIGRFAM era: GTP-binding protein Era 130 403 IPR005662 GO:0003723|GO:0005525
Bva08g00768 427 Pfam KH domain 332 409 IPR004044 GO:0003723
Bva08g00768 427 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 306 420 IPR009019 GO:0003723
Bva08g00768 427 Gene3D - 124 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00768 Bva-Chr8 3953292 3957077 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00768 K03595 - gmx:100815820 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00768 08 3953292 3957077 Bva08g00768 08 3953292 3957077 ECH