Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00751 ATGGCTCAATTTGGAAGTTTCATATCTCTGCTAACCTTTCTCTTCTTGGGGTTTCTTGGCTTAATCTCTATTCCGGCTGAGGCTGCCATAAGGAAGTACCAATTTGATATTCAAGTGAAGAATGTGAGTAGATTGTGCCATGCAAAGCCTATTGTAACTGTAAATGGGAGATATCCAGGACCAACTATTTATGCTAGAGAAGGAGACAGAGTGCAGGTCAATGTCACAAATCATGCACAATACAACATGTCAATTCACTGGCATGGACTTAAGCAATATCGTAATGGTTGGGCGGATGGACCAGCTTATGTTACACAATGTCCCATCCAGAGTGGAAGCAGCTACACTTATGACTTCAACGTCACCGGGCAAAGGGGAACATTGTGGTGGCATGCACACATTCTTTGGCTGAGGGCCACGGTTTATGGTGCAATTGTTATCATGCCAAAACCAGGAACCCCATTTCCTTTCCCGCTGCCAGCAAGAGAGTTTGAAATCCTTCTAGGTGAATGGTGGAACAATGACGTTGAGGAGATTGAAAACCAAGGGAATAGAATGGGCTTTCCACCAAATATGTCTGATACGCACACAATCAATGGGAAGCCAGGACCACTCTTTCCATGCTCTGAGAAACATACATTTGCAATGGAGGTTGAGCAGGGCAAGACCTACCTCTTAAGAATCATCAACGGTGCACTCAACGATGAGCTTTTCTTTGCCATTGCGGGTCACAATATGACAGTAGTGGAAGTTGACGCTGTATACACAAAACCATTCACCACTCAAGCCATACTAATAGCTCCTGGTCAAACCACAAATGTTCTGATCCAAGCAAATCAAGCGCCAAGCAGATACTTCGTGGCTACCAAAGCTTTTATGGATGCCCCAATCTCTGTTGACAACAAAACTGCCACAGCTATACTTCAATACAAAGGTGTCCCAAATACTGTCCTCCCCATCCTTCCCCAAATGCCTGCTAGAAATGACTCAGCTTTTGCTTTGAGCTACAGCAAGAAGCTCCGCAGCTTAAACTCTGCCCAATACCCTGCTAATGTTCCCCTCAAAGTTGATAGAAACCTCTTTTACACTATTGGATTAGGCCAAAACCCTTGCCCCACGTGCTTGAATGGAACCCGGCTAGTTGCTTCTTTGAACAATGTCTCTTTTGTGATGCCCAAGATAGCCCTTCTCCAAGCTCACTACTTTGACATTAAGTGGGCTTTCAGAACTGATTTCCCTGATAAGCCTCCAACTCCTTTCAACTACACTGGTGCACCATTAACAGCTAACCTGGGCACTAAAGTTGGCACAAGACTTAGCAAGATTGCTTTTAATTCTACTGTCGAGTTAGTGTTGCAAGACACAAATCTCCTAACAGTTGAGTCACACCCATTCCATCTTCATGGCTATAACTTCTTTGTTGTTGGAACTGGTACTGGTAATTTTGATCCTGCTAAAGACCCCGATAAGTACAATCTGGTAGATCCCATTGAGAGGAACACAGTTGGGGTTCCCACTGGTGGTTGGACAGCAATTCGATTCCGTGCTGATAATCCAGGTGTTTGGTTCATGCATTGTCATTTGGAGCTGCATACTGGTTGGGGGTTGAAAACTGCATTCGTTGTAGAAGATGGACCTGGAAATGATCAATCTGTTCTGCCTCCACCAAAGGATCTTCCACGATGCTA 1688 0.4461 MAQFGSFISLLTFLFLGFLGLISIPAEAAIRKYQFDIQVKNVSRLCHAKPIVTVNGRYPGPTIYAREGDRVQVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYVTQCPIQSGSSYTYDFNVTGQRGTLWWHAHILWLRATVYGAIVIMPKPGTPFPFPLPAREFEILLGEWWNNDVEEIENQGNRMGFPPNMSDTHTINGKPGPLFPCSEKHTFAMEVEQGKTYLLRIINGALNDELFFAIAGHNMTVVEVDAVYTKPFTTQAILIAPGQTTNVLIQANQAPSRYFVATKAFMDAPISVDNKTATAILQYKGVPNTVLPILPQMPARNDSAFALSYSKKLRSLNSAQYPANVPLKVDRNLFYTIGLGQNPCPTCLNGTRLVASLNNVSFVMPKIALLQAHYFDIKWAFRTDFPDKPPTPFNYTGAPLTANLGTKVGTRLSKIAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGTGNFDPAKDPDKYNLVDPIERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFVVEDGPGNDQSVLPPPKDLPRC 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00751 562 CDD CuRO_2_LCC_plant 166 310 IPR034285 -
Bva08g00751 562 SUPERFAMILY Cupredoxins 21 174 IPR008972 -
Bva08g00751 562 SUPERFAMILY Cupredoxins 160 336 IPR008972 -
Bva08g00751 562 Gene3D - 372 562 IPR008972 -
Bva08g00751 562 Pfam Multicopper oxidase 166 312 IPR001117 -
Bva08g00751 562 Gene3D - 22 149 IPR008972 -
Bva08g00751 562 PANTHER MULTI-COPPER OXIDASE 9 562 IPR045087 -
Bva08g00751 562 PANTHER LACCASE 9 562 - -
Bva08g00751 562 SUPERFAMILY Cupredoxins 353 562 IPR008972 -
Bva08g00751 562 Pfam Multicopper oxidase 37 150 IPR011707 GO:0005507
Bva08g00751 562 Pfam Multicopper oxidase 412 544 IPR011706 GO:0005507|GO:0016491
Bva08g00751 562 CDD CuRO_1_LCC_plant 33 149 IPR034288 GO:0005507
Bva08g00751 562 ProSitePatterns Multicopper oxidases signature 1. 520 540 IPR033138 -
Bva08g00751 562 Gene3D - 161 346 IPR008972 -
Bva08g00751 562 CDD CuRO_3_LCC_plant 408 545 IPR034289 GO:0005507
Bva08g00751 562 ProSitePatterns Multicopper oxidases signature 2. 525 536 IPR002355 GO:0005507
Bva08g00751 562 TIGRFAM laccase: laccase 28 562 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00751 Bva-Chr8 3900335 3902707 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00751 K05909 - gmx:100798427 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00751 08 3900335 3902707 Bva08g00751 08 3900335 3902707 ECH