Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00745 ATGGCTGCCTCAAGATTATCGGCAGGCGTATTCATGGCAGCGGCGGCGGCGGCTTCCATGTCCACGCTCTCCAACCACGCTTATGCCGAATCTCCCTTTCGGTTctatcctttttcttctaagTCCTCAAACCCTCCGCCCGAGGAAGACCAGAATGCAGATACCAAGCCAGAATCTCATGCGGCCCAAGAACCGACAAAGTCAGATTTTGATCCAGAGGCGTTAGAAAGAGCTGCCAAAGCTCTCCGTGAAATCAATAGTTCTACATACGCTAAACAGGTGTTCGACTTAATGAAAAAGCAAGAGCAATCACGTCTTGCTGAGTTAGACGCTGAGAAGGCTTATTATGAGTTACTTCAGTCTCGAAATGACATTGAAAGGCAGAAAAAATTGGCTGAAGAACAACGGAATCTAAtacaagagcaagcacaaagAGAAGCCCAGGCACTGCGTTTTAAAGATGAATTGACAAGGAAAAGACTGCAGGAAGATCATGAAACTCAGAGACAGCATAATGCTGAATTGGTGAAGATGCAAGAGGAATCTTCTGTAAGAAAAGAACAGGCCAGAAGGGCTACTGAAGAACAGATTCAAGCTCAGCAGCGCCAgactgagagagagagagctgaAATAGAAAGGGAAACCATAAGAGTCAAGGCCATGGCAGAGGCTGAGGCCCGGGCCCATGAAGCAAAACTCACCGAAGACCATAAGAGAAGAATGCTTATAGAACGAATGCAcggtgaaaaagagaaatggcTTGCTGCAATTAACACAACTTTTAGTCACATTGAAGGCGGTTTAAGGGTCTTGTTGACTGATAGGGATAAGCTGCTCATGGCTGTTGGAGGTGCTACTGCATTAGCTGCAGGAGTATATACTACTAGAGAAGGTGCTAAAGTTACATGGGGTTATATTAATCGGATTTTGGGTCAGCCATCTTTGATCCGAGAATCATCCATAGCAAAATTTCCAGGGTCAAGCATCATATctcaagcaaaaaataaacttgCAAAGTATATGACCAGAACAGAGAAGCCTGTCGAGAGTAAAAATGGTCTTGATAATGTAATACTCCATCCAtcattgaagaaaagaatagagcaTCTTGCACGGGCAACATCAAATACCAAGGCCCACCAGGCACCATTCCGTAATATGCTTTTTTATGGGCCTCCTGGTACTGGTAAAACTATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTAGATTATGCCATGATGACTGGAGGGGATGTTGCACCTCTGGGTCCACAGGCTGTTACGAAAATCCATGAGATTTTCGATTGGGCGAAGAAATCTAGAAAAGGCCTGCTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAATAGTGTACATATGAGTGAAGCTCAACGAAGTGCTCTAAATGCGTTGCTCTTCAGAACCGGTGATCAGTCAAGAGACATAGTGCTTGTCCTAGCTACAAACAGACCTGGTGATCTTGATAGTGCTGTTACTGACCGCATTGATGAAGTGATTGAATTCCCTCTCCCGGGAGAGGAAGAACgctttaaacttttgaaactCTATTTGAGCAAATATCTTTATGATGAGGATAGCAGTTCATCCAAGCGGGGCTTTTTACCGGGGAAGCAATCCCAAAAAGTTACCGTAAGAGATTTATCCGAGGATGTTCTGAGAGAGGCTGCCAAAAAGACAGTGGGATTCTCGGGTCGTGAGATAGCCAAGCTCATGGCCGGCGTCCAAGCAGCTGTCTACGGGCGCCCGGATTGCGTGTTGGATGCTCAGTTGTTTAGAGAAATTGTAGATTACAAAGTGGCAGAACATCATCAACGAATAAAACTGGCAGCTGAAGGCGGGTCTGCCTG 1880 0.4239 MAASRLSAGVFMAAAAAASMSTLSNHAYAESPFRFYPFSSKSSNPPPEEDQNADTKPESHAAQEPTKSDFDPEALERAAKALREINSSTYAKQVFDLMKKQEQSRLAELDAEKAYYELLQSRNDIERQKKLAEEQRNLIQEQAQREAQALRFKDELTRKRLQEDHETQRQHNAELVKMQEESSVRKEQARRATEEQIQAQQRQTERERAEIERETIRVKAMAEAEARAHEAKLTEDHKRRMLIERMHGEKEKWLAAINTTFSHIEGGLRVLLTDRDKLLMAVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSIAKFPGSSIISQAKNKLAKYMTRTEKPVESKNGLDNVILHPSLKKRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSVHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERFKLLKLYLSKYLYDEDSSSSKRGFLPGKQSQKVTVRDLSEDVLREAAKKTVGFSGREIAKLMAGVQAAVYGRPDCVLDAQLFREIVDYKVAEHHQRIKLAAEGGSA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00745 626 Pfam ATPase family AAA domain-containing protein 3, N-terminal 50 317 IPR021911 -
Bva08g00745 626 Gene3D - 328 532 IPR027417 -
Bva08g00745 626 Pfam ATPase family associated with various cellular activities (AAA) 387 514 IPR003959 GO:0005524|GO:0016887
Bva08g00745 626 ProSitePatterns AAA-protein family signature. 486 505 IPR003960 GO:0005524|GO:0016887
Bva08g00745 626 SMART AAA_5 383 516 IPR003593 -
Bva08g00745 626 MobiDBLite consensus disorder prediction 35 73 - -
Bva08g00745 626 MobiDBLite consensus disorder prediction 36 50 - -
Bva08g00745 626 PANTHER PUTATIVE ATP-ASE 1 624 IPR039188 GO:0005739|GO:0007005
Bva08g00745 626 MobiDBLite consensus disorder prediction 162 212 - -
Bva08g00745 626 CDD AAA 379 514 - -
Bva08g00745 626 MobiDBLite consensus disorder prediction 162 193 - -
Bva08g00745 626 Coils Coil 115 149 - -
Bva08g00745 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 609 IPR027417 -
Bva08g00745 626 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 624 - -
Bva08g00745 626 Coils Coil 183 217 - -
Bva08g00745 626 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00745 Bva-Chr8 3863208 3868281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00745 363 591 Miscellaneous Gene Families AT5G53170 28.992 6.74e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00745 K17681 - gmx:100777755 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00745 08 3863208 3868281 Bva08g00745 08 3863208 3868281 ECH