Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00733 ATGGGCCGAATGCCAGTTGATTCTTTGATTTACCTTTcactgagaaaaaaaaaatcaccctTCCCTCTTTCTTCAGGCGTCTGTCTTTTTTGTTACTGTCTTCCCTCTACAGTGAAGCGTCGGGAACACGCTCTCTCTCTCGGCGATCGATTTGATTGGAGGCCGGACGTAGACACCGTTCACGGCAGTTCTTCGTTCGAAACTTCTGTGACCTTCCTTTTTCTATCAAGGGGAAGGAAGATGATACGAGCAGTAATAGTGATGAACACGCAGGGGAAACCGCGTCTCGCCAAATTCTATGAATTTCGGCCCGTGGAGAAACAGCAGGAAGTAATACGTAATGTTTTTGCAGTGCTATGCAGTAGAGCGGAGAACGTAAGCAATTTCGTGGATGCTGAGTCCATCTTTGGCCcgGATGCTCGCCTTGTCTACAAGCACTTTGCAACTTTATACTTCGTATTCATCTTTGATAGTTCTGAGAACGAGCTTGCTATGCTTGACTTAATACAAGtCGTTGTTGAAACCTTGGATAAATGCTTCCGAAATGTATGTGAGCTTGATGTCGTCTTCAACTATAGCAAGATGCATACTATCCTTGATGAGATTATATTTGGAGGCCAGGTGTTAGAAACAAGTTCAGCTGAGGTTATGAAGGCAATTGAAGAAATATCAAAACTTGAAGCCGCATCCAACGCTATCAACCTTGTCCCGAAATCGGTTTCTAATTGGAGGACACGGTA 740 0.4284 MGRMPVDSLIYLSLRKKKSPFPLSSGVCLFCYCLPSTVKRREHALSLGDRFDWRPDVDTVHGSSSFETSVTFLFLSRGRKMIRAVIVMNTQGKPRLAKFYEFRPVEKQQEVIRNVFAVLCSRAENVSNFVDAESIFGPDARLVYKHFATLYFVFIFDSSENELAMLDLIQVVVETLDKCFRNVCELDVVFNYSKMHTILDEIIFGGQVLETSSAEVMKAIEEISKLEAASNAINLVPKSVSNWRTR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00733 246 Pfam Clathrin adaptor complex small chain 81 226 IPR022775 -
Bva08g00733 246 CDD AP3_sigma 81 225 IPR027155 GO:0006896|GO:0030123
Bva08g00733 246 ProSitePatterns Clathrin adaptor complexes small chain signature. 142 152 IPR000804 GO:0006886|GO:0016192|GO:0030117
Bva08g00733 246 PANTHER AP COMPLEX SUBUNIT SIGMA 81 237 - -
Bva08g00733 246 SUPERFAMILY SNARE-like 81 225 IPR011012 -
Bva08g00733 246 Coils Coil 209 229 - -
Bva08g00733 246 Gene3D - 81 239 - -
Bva08g00733 246 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 81 237 IPR016635 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00733 Bva-Chr8 3797891 3802049 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00733 K12399 - tcc:18610934 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00733 08 3797891 3802049 Bva08g00733 08 3797891 3802049 ECH