Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00731 ATGGTGCACAGCGCCTATGATTCTTTCGAACTCCTCAATGATAGCCCTTCTAAGATCGCAGCCATCGAATCGTACGGCACAAAGCTCCTATTGGGCTGCTCCGATGGATCTCTACGAGTGTACGCTCCAGAATCTTCCGATTCCGATCGGTCTCCGCCTGCCGATTACCACGCACAAGACCTGCGAAACCAAGCATACGTGCTCGAGAGGAACTTGACTGGCTTTTCTAGGAAGCCTGTGGTCTCAATGGAGGTCGTGGAATCTAGGGAGCTACTTCTTTCACTTTCTGAATCCATCGCTTTCCACAGGCTTCCAAATTTTGAAACCATAGCTGTCATCACCAAAGCCAAGGGCGCCAACGTCTTCTGCTGGGATGACCGTAGAGGCTTCTTATGCTTCGCAAGGCAAAAGAGGGTCTGTATTTTCCGGCACGATGGTGGTAGAGGATTTGTGGAGGTGAAAGACTTTGGTGTTCCAGACGTGGTAAAGTCGATGTCTTGGTGTGGtgaaaatatatgtttggGGATTAGAAAAGAATATGTAATACTGAATACTACAAATGGTGCATTGTCTGAGGTATTTACTTCTGGGAGACTAGCACCGCCGTTAGTGGTCTCGCTTCCTTCTGGAGAACTTCTTCTAGGAAAGGAGAACATTGGGGTCTTTGTGGACCAAAATGGGAAACTTCGTCCAGAAGGTAGGATTTGTTGGTCAGAGGCCCCTACAGAAGTGGTGATTCAAAAGCCATATGCTGTAGCTCTTCTGCCCAGATTTGTGGAGATTCGATCTCTCCGAGATCCATATCCATTAATACAGACTGTTGTTCTCCGGAATGTTCGTCATATTCGCAAAAGCAACAATTCTGTGATACTTTCATTAGATAATTCTGTTCATGGTCTCTTCCCTGTTCCTGTTGGAGCCCAGATTGTCCAGTTAACAGCCTctggtaactttgaagaagcCTTGTCACTGTGCAAGCTCCTTCCACCAGAAGATTCAAGTCTTCGTGCTGCAAAGGAGGCATCAATCCATATTAGATATGCGCACTATCTTTTCGATAATGGGAGTTATGAGGAGGCTATGGAGCATTTTCTGGCATCTCAAGTAGATATAACTTATGTGCTTTCCCTGTATCCATCTATTGTCCTTCCAAAGACAACTATTATTCGTGAGCCAGAGAAATTGGACAGTCCTTTGGGTGCTTCTAATCTCTCTAGAGCTTCTTCGGGTTTGTCAGATGATATGGAACCCTCAACACATATGTTGGAATTTGATGAGAGTGCTGCACTTGAATCCAAAAAGATGAACCATAATATGCTTATGGCTCTCATAAAGTTTTTGCAAAAGAAGAGACTTATTGTTGTTGAAAAGGCTGCTACTGAAGGAACAGAGGAGGTTGTTTTAGATGTAGTTGGGGATAACTTTGCATCCTATAATAGTAGTAGgtttaagaaaacaaacaagGGGCATGGTAGTGTTTCTGTTAGCTCAGGTGCTCGGGAGATGGCTTCTATATTGGATACTGCACTACTTCAGGCGTTGCTTCTTACTGGACAACCTTCCTCAGCTTTGGAGTTACTGAGAGGTCTTAACTACTGTGATTTGAAGATATGTGAAGAGATACTTCAGAAAGGAAACCATCACGTTGCTTTATTAGAACTTTATAAGTGCAATTCAATGCACCGGGAAGCTCTTGAACTTCTTCATAAATTGGTGGAAGACTCAAAGTCATCACAAGCTGAGATTGCACATAAATTTAAGCCTGAGAGAATTATTGAGTACCTCAAgCCTCTATGTGGGACAGACCCTATGCTTGTTCTGGAGTTCTCGATGCTTGTTCTTGAAAGCTGTCCAACTCAAACCATTGAGCTTTTTCTCTCTGGAAATATTCCAGCAGATATGGTGAACTCGTATTTGAAGCAACATTCTCCAAATATGCAGGCCACGTATTTGGAACTCATGCTTGCTATGAACGAGAATGCAATTTCTGGAAATTTGCAAAATGAAATGATACAAATCTATCTTTCCGAAGTACTTGATTGGTATGCAGATTTAAGTGCTCAACAGAAATGGGATGAGAAATCTTATTCCCcaacaaggaagaaattattGTGTGCCCTAGAGAGTATCACAGGATACAGTTCAGAGGCTTTACTGAAACGGCTTCCCTCTGATGCTTTATATGAAGAGCGTGCAATTTTGCTGGGAAAAATGAACCAACATGAATTGGCATTATCACTGTATGTTCACAAGCTTCATGTTCCGGAATTGGCATTGTCTTACTGTGATCGGGTGTATGAGCAAATACATCAGCCATCTGCCAAAACTGCCAGCAACATATACCTAACTCTTCTGCAAATCTATTTGAATCCACGGAGGACAACCAAGAGCTTTGAAAAGAGAATTACAAATCTATTATCTCCCCAGAATACAGGCATTCCAAAGGTACCCTCATTGACTTCAGTAAAATCTAAGGGAGGCCGTGGAACTAAAAAAATTGCTGCAATAGAGGGTGCAGAGGACATGAGAGTTAGTTGGAGCAGCACGGACAGTAGCAGGAGTGATGGTGATGCAGATGAATTTAGTGAGGAAGGAGGTACTACCATCATGCTTGATGAAGTCCTTGATTTGTTGAGCCGCAGGTGGGATAGAATAAATGGAGCTCAAGCTCTTAAACTTCTACCTAGAGAGACTAAACTACagAACTTGCTTCCATTTCTTGGCCCCCTTCTACGGAAATCTAGTGAGATGTACCGGAATTGCTCGGTGATCAAGAGTTTGAGACAGAGTGAGAACCTTCAGGTGAAAGATGAACTCTACAATCAGAGAAAAGCAGTTGTGAAGATAACCAGTGATAGCATGTGCTCTCTATGCAATAAGAAAATAGGGACAAGTGTGTTTGCAGTCTACCCCAATGGGAAAACACTAGTGCATTTCGTTTGCTTTAGAGATTCTCAAAGTATGAAAGCTGTGGCGAAAGGATCTCCACTGAGAAAGCGGTTATA 3005 0.421 MVHSAYDSFELLNDSPSKIAAIESYGTKLLLGCSDGSLRVYAPESSDSDRSPPADYHAQDLRNQAYVLERNLTGFSRKPVVSMEVVESRELLLSLSESIAFHRLPNFETIAVITKAKGANVFCWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVPDVVKSMSWCGENICLGIRKEYVILNTTNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLRPEGRICWSEAPTEVVIQKPYAVALLPRFVEIRSLRDPYPLIQTVVLRNVRHIRKSNNSVILSLDNSVHGLFPVPVGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEASIHIRYAHYLFDNGSYEEAMEHFLASQVDITYVLSLYPSIVLPKTTIIREPEKLDSPLGASNLSRASSGLSDDMEPSTHMLEFDESAALESKKMNHNMLMALIKFLQKKRLIVVEKAATEGTEEVVLDVVGDNFASYNSSRFKKTNKGHGSVSVSSGAREMASILDTALLQALLLTGQPSSALELLRGLNYCDLKICEEILQKGNHHVALLELYKCNSMHREALELLHKLVEDSKSSQAEIAHKFKPERIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGNIPADMVNSYLKQHSPNMQATYLELMLAMNENAISGNLQNEMIQIYLSEVLDWYADLSAQQKWDEKSYSPTRKKLLCALESITGYSSEALLKRLPSDALYEERAILLGKMNQHELALSLYVHKLHVPELALSYCDRVYEQIHQPSAKTASNIYLTLLQIYLNPRRTTKSFEKRITNLLSPQNTGIPKVPSLTSVKSKGGRGTKKIAAIEGAEDMRVSWSSTDSSRSDGDADEFSEEGGTTIMLDEVLDLLSRRWDRINGAQALKLLPRETKLQNLLPFLGPLLRKSSEMYRNCSVIKSLRQSENLQVKDELYNQRKAVVKITSDSMCSLCNKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKGSPLRKRL 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00731 1001 PANTHER CNH DOMAIN CONTAINING 1 1000 IPR032914 GO:0016192
Bva08g00731 1001 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 609 793 IPR000547 GO:0006886|GO:0016192
Bva08g00731 1001 Pfam CNH domain 27 280 IPR001180 -
Bva08g00731 1001 Pfam Vacuolar sorting protein 39 domain 1 506 614 IPR019452 -
Bva08g00731 1001 ProSiteProfiles Citron homology (CNH) domain profile. 16 289 IPR001180 -
Bva08g00731 1001 PANTHER VACUOLAR SORTING PROTEIN 39 1 1000 - -
Bva08g00731 1001 Pfam Vacuolar sorting protein 39 domain 2 875 983 IPR019453 -
Bva08g00731 1001 SUPERFAMILY WD40 repeat-like 20 190 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00731 K20183 - qsu:111998801 1633.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00731 08 3789343 3796482 Bva08g00731 08 3789343 3796482 ECH