Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00729 ATGTTCCTTCGAAGAAGGCAGACCCAAACTCAGCAGGAGAATGATTCCTCATATCAAGAAGAAAAGGTGGCTGAACTCAGGGCTGCTCTTGGACCCCTGTCTGGTCGTAGTTTAAAGTATTGCACAGATGCATGTATAAGGAGATATTTAGAGGCTCGGAATTGGAATTTTGAGAAATCTAAGAAAATGCTCGAGGAGACACTCAAGTGGAGGGCCAGTTATAAGCCTGAGGAAATCCGTTGGCCTGAAGTTGCCCATGAGGGTGAGACAGGGAAAGTATCCAGAGCAAATTTTCATGATCGACATGGGAGGACTGTGCTTATATTGAGGCCAGGGATGCAGAACACAGCGTCACCAGAAAATAATATCCGGCATTTGGTCTACCTATTGGAAAATGCTATCCTGAATCTTTCCGAAGGTCAAGAACAAATGTCTTGGTTGATAGACTTCACCGGATTTTCACTCAACACAAATCTCTCTATCAAAACAGCCCGTGATATTATTCACATTTTACAGAACCACTATCCAGAAAGACTTGGTATTGCTTTTCTGTATAATCCACCAAGAATATTCCAGGCATTCTACAAGGCTGTCAAATACTTCCTGGACACAAAGACAGCCCAGAAGGTGAAATTTGTTTATCCTAAAAACAAGGAGAGTCTGGAGCTGATGAAGACATTCTTTGACATAGAAAATCTTCCCAGTGAATTTGGGGGCCAAGCCACCCTGAAGTATGATCATGAAGAGTTCTCGCGAATGATGGCAGAGGATGATGTGAAGACTGCCATGTTCTGGGGGCTTGATGAGAAGCCCTTGCGTAAGAAGAATGAGCATTCTGGAACAGAGGTGTCACCAGAACCACTATCTAGTTG 872 0.4369 MFLRRRQTQTQQENDSSYQEEKVAELRAALGPLSGRSLKYCTDACIRRYLEARNWNFEKSKKMLEETLKWRASYKPEEIRWPEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTASPENNIRHLVYLLENAILNLSEGQEQMSWLIDFTGFSLNTNLSIKTARDIIHILQNHYPERLGIAFLYNPPRIFQAFYKAVKYFLDTKTAQKVKFVYPKNKESLELMKTFFDIENLPSEFGGQATLKYDHEEFSRMMAEDDVKTAMFWGLDEKPLRKKNEHSGTEVSPEPLSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00729 290 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Bva08g00729 290 CDD SEC14 99 240 IPR001251 -
Bva08g00729 290 Gene3D - 3 283 IPR036865 -
Bva08g00729 290 MobiDBLite consensus disorder prediction 1 20 - -
Bva08g00729 290 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 6 288 - -
Bva08g00729 290 SUPERFAMILY CRAL/TRIO domain 81 259 IPR036865 -
Bva08g00729 290 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Bva08g00729 290 PANTHER GH16843P 6 288 - -
Bva08g00729 290 Pfam CRAL/TRIO domain 93 239 IPR001251 -
Bva08g00729 290 SUPERFAMILY CRAL/TRIO N-terminal domain 13 82 IPR036273 -
Bva08g00729 290 Pfam CRAL/TRIO, N-terminal domain 41 66 IPR011074 -
Bva08g00729 290 MobiDBLite consensus disorder prediction 1 17 - -
Bva08g00729 290 SMART sec14_4 87 242 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00729 Bva-Chr8 3780639 3783986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00729 48 234 Acyl Lipid Metabolism Gene Families AT1G55840 26.601 1.14e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00729 - - gmx:100782334 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00729 08 3780639 3783986 Bva08g00729 08 3780639 3783986 ECH