Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00719 ATGAAGTGCCCGTACTGCTCGGCGGCGCAGGGGCGTTGTGCCACCACCAGCAGTGGCCTTTCCATTACGGAGTGCAGTTCTTGTGGACGAGTTGTTGAAGAGCGACAATCCCATCCTCACCATTTGTTTCACCTCCGTGCCCAAGACAACCCTCTCTGTCTCGTCACATCGGACCTCCCCACCCTCCAAGTCTTCCGTCAAAACAACGATGACGACCCATTCGAACCCACCGGCTTCATCACTGCCTTCTCCACCTGGTCCCTCGAGCCTAGCCCTCTTTACCTTCAATCCTGCCTATCCTTCTCCGGCCACCTCGCCGAGCTTGAGCGCACTATTGAATCCTCTTCATCATCCTCATCGTCTTCGACCGTTGTTGTTGATAACTTGAGGGCCTATATGCAGATTATAGATGTTGCATCGATACTAGGGTTGGACTACGATATTTCGGACCACGCGTTTCAATTATTCAGGGATTGCTGCTCCGCTACTTGTTTGAGAAACCGGAGCGTCGAAGCCCTTGCTACTGCTGCTCTTGTTCAGGCCATCAGAGAGGCTCAAGAGCCCAGAACTCTTCAGGAAATTTCAATTGCTGCCAATGTTCCACAAAAGGAAATTGGGAAATACATCAAGATACTGGGAGAAGCTTTGCAGTTAAGTCAACCTATTAACAGCAATTCCATCTCAGTCCATATGCCCAGATTTTGCACACTTTTACAACTCAATAAATCTGCTCAGGAACTGGCCACTCACATAGGAGAGGTCGTGATCAACAAATGCTTTTGCACGCGCCGGAATCCTATTAGCATTTCAGCTGCTGCCATATATTTGGCCTGTCAGCTGGAAGACAAACGCAAAACACAGGCTGAAATTTGCAAGGTCACTGGTCTTACTGAAGTCACACTCCGTAAAGTATATAAGGAACTATTGGAGAATTGGGATGATTTGCTTCCCTCTAATTACACTCCAGCTGTTCCTCCTGAGAGGGCATTCCCAACTACCATAATTGCTTCAGGTCGTTCTTCAACTACCAAGGCTGAAGTAGTAGAAGTTACTTCTGTGGACCGAGAGAAGTTGCCAGAAATTAAACCTAGCAAATCAAATGAGGTCTCAGTTACGGTGCATCAGATGAGAGTTAAAGAGGACGTTGAATGTAAAAGTAATACTCGTTCAACTTATTCCTCACTGAGTCAGCAATCAAGTTTCTGGCAATCCCACCTTCCCATCGGTACATCCAATCTTAGAACAACAGgagaaaaaaatcagaatGTTTTACAAGGAATGGACATTGATGGACTGCAGCGTAACCACCAGCAGCCAGAACTGAAGGTAGAGGACACAAATGGCTCGGCTAGTTCCCAAAAATCAAACCATCTTAGTAGCCCTCCTACTTCAAGTTCTACCTCTGTCATGAGGCCATATTCGGCTTCACCTTCATCTGGGCCGAATGCTCGTTTAGTGCAACCTCCCCAAGTTAATCCCAGGCCATCCTG 1490 0.4711 MKCPYCSAAQGRCATTSSGLSITECSSCGRVVEERQSHPHHLFHLRAQDNPLCLVTSDLPTLQVFRQNNDDDPFEPTGFITAFSTWSLEPSPLYLQSCLSFSGHLAELERTIESSSSSSSSSTVVVDNLRAYMQIIDVASILGLDYDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTIIASGRSSTTKAEVVEVTSVDREKLPEIKPSKSNEVSVTVHQMRVKEDVECKSNTRSTYSSLSQQSSFWQSHLPIGTSNLRTTGEKNQNVLQGMDIDGLQRNHQQPELKVEDTNGSASSQKSNHLSSPPTSSSTSVMRPYSASPSSGPNARLVQPPQVNPRPS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00719 496 CDD CYCLIN 131 212 IPR013763 -
Bva08g00719 496 SMART cyclin_7 229 310 IPR013763 -
Bva08g00719 496 SMART cyclin_7 133 214 IPR013763 -
Bva08g00719 496 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 482 IPR000812 GO:0006352|GO:0070897
Bva08g00719 496 Pfam Transcription factor TFIIB repeat 229 310 IPR013150 GO:0017025
Bva08g00719 496 Pfam Transcription factor TFIIB repeat 131 212 IPR013150 GO:0017025
Bva08g00719 496 Gene3D - 229 325 - -
Bva08g00719 496 MobiDBLite consensus disorder prediction 442 486 - -
Bva08g00719 496 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 482 - -
Bva08g00719 496 MobiDBLite consensus disorder prediction 439 496 - -
Bva08g00719 496 SUPERFAMILY Cyclin-like 227 325 IPR036915 -
Bva08g00719 496 CDD CYCLIN 231 309 IPR013763 -
Bva08g00719 496 SUPERFAMILY Cyclin-like 130 220 IPR036915 -
Bva08g00719 496 Gene3D - 129 220 - -
Bva08g00719 496 PRINTS Transcription initiation factor IIB signature 175 194 IPR000812 GO:0006352|GO:0070897
Bva08g00719 496 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Bva08g00719 496 PRINTS Transcription initiation factor IIB signature 201 216 IPR000812 GO:0006352|GO:0070897
Bva08g00719 496 PRINTS Transcription initiation factor IIB signature 296 310 IPR000812 GO:0006352|GO:0070897
Bva08g00719 496 PRINTS Transcription initiation factor IIB signature 230 248 IPR000812 GO:0006352|GO:0070897
Bva08g00719 496 PRINTS Transcription initiation factor IIB signature 264 280 IPR000812 GO:0006352|GO:0070897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00719 Bva-Chr8 3717402 3720168 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00719 K03124 - gmx:102662353 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00719 08 3717402 3720168 Bva08g00719 08 3717402 3720168 ECH