Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00716 ATGGAGGTGgctaaacaagaaaatgaatcaaagtTCAACAATTACGCTTTTGCTTGTGCTGTAGTCGCTTCTATGGTATCCATTATATTTGGTTATGATACTGGTGTGATGAGTGGGGCCATGATATTCATAAAGGAAGATCTCAAAATCAGTGACACCCAAGTGGAGGTTCTAGCAGGAATCTTAAACCTCTGCGCGTTAGTGGGATCCTTAGCCGCAGGAAGAACCTCCGATTACGTAGGTCGCCGCTATACTATTGTCACGGCCTCCATCCTATTCATGCTCGGTGCAATTCTCATGGGCTACAGTCCCAACTATGCAATCTTAATGGTCGGAAGATGCACCGCTGGTGTCGGCGTGGGCTTTGCCCTTATGATTGCCCCTGTTTACTCTGCAGAGATCTCTTCTGCCAAATCCAGGGGTTTCCTCACCTCGCTCCCAGAGCTCTGCATTGGCATTGGGATCTTATTTGGCTATGTATCCAACTTCTTATTTGGGAAATTGACTTTGAAACTTGGATGGAGATTGATGCTCGGCATTGCAGCAATTCCTTCACTTGCTTTGGTTTTTGGCATTCTAGCAATGCCAGAGTCTCCAAGGTGGCTAGTCATGCAGGGCCGTTTAGGAGGCGCCAAGAAAGTGCTGAAGCAAATATCTAATACTCCAGAAGAGGCTGAACATCGCTTCAGGGACATAAAAATTGCTGCTGGAATTGACGAGAATTGCCAAGACGACGTCGTCAAGGTCCCTGAAAATAGCAAGGGGGAAGGGGTTTGGAAAGAGTTGCTCCTGAAGCCTACACCTGCTGTTCGTTGGATGCTAACTGCAGCTGTTGGGATTCACTTCTTTGAGCACGCAACTGGGATTGAAGCTGTCGTTTTATACAGCCCAAGAATCTTTAGGAAAGCTGGTGTCACCGGTAAGGACAAGCTCTTGCTTGCAACGGTTGGAGTAGGCCTTACGAAGATCTTCTTTCTGGTTATATCGTCATTCTTGCTGGACAGAGTTGGGAGGAGACGCCTCTTGCTGGTCAGCACAGCGGGGATGATTGGTGCTCTCGCGGTGTTGGGGTTCAGCTTGACCATGGCAGACCATTCCAAGCAGAGTCTCTTATGGGCCTTGGGTCTTAGCATTGCTGCCACTTACACCTTCGTTGCTTTCTTTAATATTGGGCTTGGGCCTGTCACGTGGGTCTACAGCTCTGAGATATTTCCTTCGAAGCTTAGAGGACAAGGGGCAAGTATTGGAGTTGCCGTGAATAGAATCATGAATGCCGTTGTATCTATGACTTTTATATCAATCTACAAGGCTATAACCATTGGTGGggcatttttcatttttgccgGTATATCTGCGTTGGCTTGGGTGTTCTTTTTCGTGTTCTTGCCAGAGACCAAAGGCAGGTCCTTGGAAGAGATGGAGGCgcttttcagtaaaaaatctAGTCATAGAAATGTAGTTAATGAGACAGCTCCCAGAGGGAATGTCTA 1490 0.4564 MEVAKQENESKFNNYAFACAVVASMVSIIFGYDTGVMSGAMIFIKEDLKISDTQVEVLAGILNLCALVGSLAAGRTSDYVGRRYTIVTASILFMLGAILMGYSPNYAILMVGRCTAGVGVGFALMIAPVYSAEISSAKSRGFLTSLPELCIGIGILFGYVSNFLFGKLTLKLGWRLMLGIAAIPSLALVFGILAMPESPRWLVMQGRLGGAKKVLKQISNTPEEAEHRFRDIKIAAGIDENCQDDVVKVPENSKGEGVWKELLLKPTPAVRWMLTAAVGIHFFEHATGIEAVVLYSPRIFRKAGVTGKDKLLLATVGVGLTKIFFLVISSFLLDRVGRRRLLLVSTAGMIGALAVLGFSLTMADHSKQSLLWALGLSIAATYTFVAFFNIGLGPVTWVYSSEIFPSKLRGQGASIGVAVNRIMNAVVSMTFISIYKAITIGGAFFIFAGISALAWVFFFVFLPETKGRSLEEMEALFSKKSSHRNVVNETAPRGNV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00716 496 PRINTS Sugar transporter signature 378 399 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva08g00716 496 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva08g00716 496 PRINTS Sugar transporter signature 110 129 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva08g00716 496 PRINTS Sugar transporter signature 27 37 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva08g00716 496 PRINTS Sugar transporter signature 401 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva08g00716 496 Pfam Sugar (and other) transporter 19 477 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva08g00716 496 ProSiteProfiles Major facilitator superfamily (MFS) profile. 19 466 IPR020846 GO:0022857
Bva08g00716 496 PANTHER POLYOL TRANSPORTER 3-RELATED 8 488 - -
Bva08g00716 496 Gene3D MFS general substrate transporter like domains 8 482 IPR036259 -
Bva08g00716 496 SUPERFAMILY MFS general substrate transporter 9 474 IPR036259 -
Bva08g00716 496 TIGRFAM SP: MFS transporter, sugar porter (SP) family 10 473 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva08g00716 496 CDD MFS_PLT 22 473 IPR044776 GO:0005351
Bva08g00716 496 ProSitePatterns Sugar transport proteins signature 1. 329 346 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva08g00716 496 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 8 488 IPR045262 GO:0015144
Bva08g00716 496 ProSitePatterns Sugar transport proteins signature 1. 73 90 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00716 Bva-Chr8 3707867 3710707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00716 7 480 Organic Solute Cotransporters AT4G36670 68.421 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00716 - - qsu:112005222 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00716 08 3707867 3710707 Bva08g00716 08 3707867 3710707 ECH