Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00697 ATGAGTTCGCTTAATCTTGGTACGTGGGCTCGACCCAGTTGTTTGCTAAACCAAGTAGGAAGATCCAGATCCCCATCTTTTCTTCTCCTCAATGGTATCAGAAAGGCACCCATTTCCATCCTTACCCCTAAACGACGAAGCAAACCACAGTCGTCTTTCTCGTCTCTCGCCATCTCTGCGGTGCTCGCCAAAGAAGACACcgtcaaaaaagaagaaggagaggACAAACCcacattcaattttaaaacttacatGGTCCAAAAGGCCCAATCGGTGAATCAAGCCTTGGACGCAGCTGTTTCGCTTAAGGAACCCCTGAAAATCCACGAGGCCATGCGGTACTCACTGCTCGCCGGCGGCAAGCGCGTTCGCCCAGTGCTGTGTATCGCTGCATGCGAGCTCGTCGGCGGCGACGAAGCAACAGCCATGCCAGCTGCTCTCGCCATCGAGATGATTCATACTATGTCGCTGATTCACGATGATCTACCCTGTATGGACAATGATGGCCTCCGGCGAGGAAATCCTACGAATCATAAGGTTTACGGCGAGGATGTCGCGGTTCTGGCCGGTGATGCTCTTCTGTCTTTTGCATTCGAACACCTAGCTGTGTCCACCATAGGTGTTCCACCTGAGAAGATAATTCGCGCAGTTGGTGAGCTAGCAAAATCAATTGGCACTGAAGGCCTCGTTGCTGGGCAAGTCGTGGATATAGATTCAGAAGGAGTGTCTGAGGTGGGATTGGAAAAACTCGAATTTATTCATATTCACAAAACCGCAGCTTTGCTGGAAGCGTCAGTTGTGCTTGGGGCAATAGTCGGAGGTGGTTCTGATGAAGAgattgaaaaattaaggaagTTTGCCAGGTACATCGGATTGTTGTTCCAGGTTGTGGATGATATCCTCGATGTCACCAAATCGTCCCAGGAATTGGGGAAGACAGCTGGTAAGGACTTGGTGGCTGATAAAACTACATATCCGAAGCTTCTGGGGTTAGAGAAATCGATGGAGTTTGCTGAGAAATTAAACAAGGACGCACAAGACCAGCTCTCTGGGTTTGATCCGGAGAAAGCGGCCCCCTTGATTGCTTTAGCCAATTATATTGCTTACAGGCAAAACTA 1118 0.4714 MSSLNLGTWARPSCLLNQVGRSRSPSFLLLNGIRKAPISILTPKRRSKPQSSFSSLAISAVLAKEDTVKKEEGEDKPTFNFKTYMVQKAQSVNQALDAAVSLKEPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAALAIEMIHTMSLIHDDLPCMDNDGLRRGNPTNHKVYGEDVAVLAGDALLSFAFEHLAVSTIGVPPEKIIRAVGELAKSIGTEGLVAGQVVDIDSEGVSEVGLEKLEFIHIHKTAALLEASVVLGAIVGGGSDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLLGLEKSMEFAEKLNKDAQDQLSGFDPEKAAPLIALANYIAYRQN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00697 372 SFLD Isoprenoid Synthase Type I 84 370 - -
Bva08g00697 372 SFLD Polyprenyl Transferase Like 84 370 - -
Bva08g00697 372 Pfam Polyprenyl synthetase 108 341 IPR000092 GO:0008299
Bva08g00697 372 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 372 - -
Bva08g00697 372 ProSitePatterns Polyprenyl synthases signature 1. 157 173 IPR033749 -
Bva08g00697 372 Coils Coil 328 348 - -
Bva08g00697 372 CDD Trans_IPPS_HT 108 370 IPR000092 GO:0008299
Bva08g00697 372 ProSitePatterns Polyprenyl synthases signature 2. 290 302 IPR033749 -
Bva08g00697 372 Gene3D Farnesyl Diphosphate Synthase 73 372 IPR008949 -
Bva08g00697 372 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 1 372 - -
Bva08g00697 372 SUPERFAMILY Terpenoid synthases 82 354 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00697 Bva-Chr8 3600583 3602166 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00697 K13789 - jre:108995354 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00697 08 3600583 3602166 Bva11g01638 11 15027169 15028782 BWGD
Bva08g00697 08 3600583 3602166 Bva08g00697 08 3600583 3602166 ECH