Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00691 ATGACGGTCTCATACTGtgtgaaggagaagaaagcgTGTGTGGGTTGGGTTCAGAAATACTTCAAAGACTGCCTCTGCAATGTGAGAGATGACTTCTCCTTCGCTTTTGGTATCTGCAGTCTATTATGCTGGGGAGTCGCAGAAATACCACAGATTATCACCAATTTCCACACCAAGTCCAGCCATGGCGTCTCCCTTCTTTTCCTCCTCACTTGGGTTGCTGGAGATATATTCAATCTAGTGGGTTGTCTTCTGGAACCTGCCACGTTGCCTACCCAGTTCTACACAGCTCTGCTCTACACAATCACAACGATTGTATTGGTATTGCAAAGCGTATACTACGATCACATCTACGGATGGTGGAAACGCGGTcacaaaagcaacaaaaaacaAGgcgaagaagagaaaaaagcgTTAAGACCGAAGCCAAGCCATGACGAGTCTGGGATTGTAATACCAAATGGTGCAGTAAAAGGAACAGCTCGAAGGGAGTTCTATTATACGTCGGCGAGATCATTGGCCGGGAGTGGTACGCCACCGTTTCGTAGCTACCTGAGGGTTGCCAAAAGTGGTCCTTCAGCCATGCAATTGAACTCCGACTCCTCCGACGATGAAGACTCACCTCCTCTTTCCCCCACTCTCCCGAGACCCATCCCCCGTTCTGCCGCTCTGCCTACTAGTTATGGAACATTTCTAGCAGCATCACTTAATCTGCCTCTCAAGGGTGATGCAGGATTTACCGGGAGAAAACTCTTACAGCAGGAGCATGAGATACACAGTGCTTTTGGTCAATGGTTAGGATGGCTTATGGCTGCTATATACATGGGTGGCCGCATCCCTCAGATATGGTTGAACATCAAAAGGGGGAGCGTGGAGGGCTTAAATCCTTTCATGTTCGTTTTTGCGTTGATTGCCAATGTCACTTACGTTGGAAGTATTCTTGTACGAACTACTGAATGGGAAAACATCAAAGCTAATCTGCCATGGCTGTTGGATGCCATTGTTTGCGTGGCATTGGACCTATTTATAATATTGCAGTACATTTACTACAGATACTTGCGGAGGAGAGCAGCATGCGATGGTAATTATGGATTCTATGAAGAAGCAAGTAAAGGGGTTGCTGCATCATG 1130 0.4469 MTVSYCVKEKKACVGWVQKYFKDCLCNVRDDFSFAFGICSLLCWGVAEIPQIITNFHTKSSHGVSLLFLLTWVAGDIFNLVGCLLEPATLPTQFYTALLYTITTIVLVLQSVYYDHIYGWWKRGHKSNKKQGEEEKKALRPKPSHDESGIVIPNGAVKGTARREFYYTSARSLAGSGTPPFRSYLRVAKSGPSAMQLNSDSSDDEDSPPLSPTLPRPIPRSAALPTSYGTFLAASLNLPLKGDAGFTGRKLLQQEHEIHSAFGQWLGWLMAAIYMGGRIPQIWLNIKRGSVEGLNPFMFVFALIANVTYVGSILVRTTEWENIKANLPWLLDAIVCVALDLFIILQYIYYRYLRRRAACDGNYGFYEEASKGVAAS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00691 376 MobiDBLite consensus disorder prediction 193 208 - -
Bva08g00691 376 Gene3D - 33 119 - -
Bva08g00691 376 Gene3D - 263 358 - -
Bva08g00691 376 MobiDBLite consensus disorder prediction 129 152 - -
Bva08g00691 376 PANTHER PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN 1 371 - -
Bva08g00691 376 MobiDBLite consensus disorder prediction 193 221 - -
Bva08g00691 376 Pfam PQ loop repeat 263 320 IPR006603 -
Bva08g00691 376 Pfam PQ loop repeat 32 88 IPR006603 -
Bva08g00691 376 SMART ctns 46 77 IPR006603 -
Bva08g00691 376 SMART ctns 276 307 IPR006603 -
Bva08g00691 376 MobiDBLite consensus disorder prediction 129 144 - -
Bva08g00691 376 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00691 Bva-Chr8 3572939 3576296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00691 K23678 - tcc:18610999 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00691 08 3572939 3576296 Bva08g00691 08 3572939 3576296 ECH